Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HLA-BQ31612 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-BQ31612 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-BQ31612 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HLA-BQ31612 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HLA-BQ31612 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-BQ31612 LINC01144-201ENST00000626198 1710 ntBASIC15.73■□□□□ 0.11
HLA-BQ31612 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-BQ31612 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-BQ31612 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-BQ31612 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-BQ31612 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-BQ31612 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-BQ31612 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-BQ31612 AC068880.1-201ENST00000507289 2297 ntBASIC15.73■□□□□ 0.11
HLA-BQ31612 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-BQ31612 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
HLA-BQ31612 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.72■□□□□ 0.11
HLA-BQ31612 SLC25A47P1-201ENST00000531577 414 ntBASIC15.72■□□□□ 0.11
HLA-BQ31612 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 AC036164.1-201ENST00000570544 333 ntBASIC15.72■□□□□ 0.11
HLA-BQ31612 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.72■□□□□ 0.11
HLA-BQ31612 LINC01115-203ENST00000606068 577 ntBASIC15.72■□□□□ 0.11
HLA-BQ31612 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 RPSAP52-203ENST00000622976 1023 ntBASIC15.72■□□□□ 0.11
HLA-BQ31612 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.72■□□□□ 0.11
HLA-BQ31612 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
HLA-BQ31612 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-BQ31612 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-BQ31612 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-BQ31612 AC060834.1-201ENST00000443027 2032 ntBASIC15.72■□□□□ 0.11
HLA-BQ31612 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-BQ31612 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 KRT8P22-201ENST00000562317 1415 ntBASIC15.71■□□□□ 0.11
HLA-BQ31612 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-BQ31612 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HLA-BQ31612 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-BQ31612 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-BQ31612 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-BQ31612 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-BQ31612 MIR4538-201ENST00000581377 78 ntBASIC15.71■□□□□ 0.11
HLA-BQ31612 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.71■□□□□ 0.11
HLA-BQ31612 AC133539.2-201ENST00000604757 467 ntBASIC15.71■□□□□ 0.11
HLA-BQ31612 AL606495.2-201ENST00000605867 535 ntBASIC15.71■□□□□ 0.11
HLA-BQ31612 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.71■□□□□ 0.11
HLA-BQ31612 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HLA-BQ31612 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-BQ31612 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-BQ31612 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.71■□□□□ 0.1
HLA-BQ31612 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.71■□□□□ 0.1
HLA-BQ31612 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
HLA-BQ31612 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.71■□□□□ 0.1
HLA-BQ31612 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.71■□□□□ 0.1
HLA-BQ31612 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HLA-BQ31612 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HLA-BQ31612 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms