Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
GABREP78334 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.48■□□□□ 0.07
GABREP78334 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.48■□□□□ 0.07
GABREP78334 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.48■□□□□ 0.07
GABREP78334 KRT223P-202ENST00000449164 1292 ntBASIC15.48■□□□□ 0.07
GABREP78334 AC007389.4-201ENST00000454674 793 ntBASIC15.48■□□□□ 0.07
GABREP78334 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.48■□□□□ 0.07
GABREP78334 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.48■□□□□ 0.07
GABREP78334 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.48■□□□□ 0.07
GABREP78334 AC124947.2-201ENST00000547118 1133 ntBASIC15.48■□□□□ 0.07
GABREP78334 AP005482.1-201ENST00000563722 1273 ntBASIC15.48■□□□□ 0.07
GABREP78334 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.48■□□□□ 0.07
GABREP78334 MIR6069-201ENST00000620069 79 ntBASIC15.48■□□□□ 0.07
GABREP78334 AL033527.4-201ENST00000641026 673 ntBASIC15.48■□□□□ 0.07
GABREP78334 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
GABREP78334 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.48■□□□□ 0.07
GABREP78334 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.48■□□□□ 0.07
GABREP78334 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.48■□□□□ 0.07
GABREP78334 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.48■□□□□ 0.07
GABREP78334 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GABREP78334 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.47■□□□□ 0.07
GABREP78334 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
GABREP78334 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.47■□□□□ 0.07
GABREP78334 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
GABREP78334 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.47■□□□□ 0.07
GABREP78334 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
GABREP78334 AC245100.3-201ENST00000441281 285 ntBASIC15.47■□□□□ 0.07
GABREP78334 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.47■□□□□ 0.07
GABREP78334 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.47■□□□□ 0.07
GABREP78334 AL589987.1-201ENST00000453380 819 ntBASIC15.47■□□□□ 0.07
GABREP78334 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.47■□□□□ 0.07
GABREP78334 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.47■□□□□ 0.07
GABREP78334 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.47■□□□□ 0.07
GABREP78334 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.47■□□□□ 0.07
GABREP78334 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.47■□□□□ 0.07
GABREP78334 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.47■□□□□ 0.07
GABREP78334 MIR4259-201ENST00000584466 101 ntBASIC15.47■□□□□ 0.07
GABREP78334 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.47■□□□□ 0.07
GABREP78334 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
GABREP78334 COX11-210ENST00000639671 696 ntBASIC15.47■□□□□ 0.07
GABREP78334 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
GABREP78334 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
GABREP78334 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GABREP78334 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
GABREP78334 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.46■□□□□ 0.07
GABREP78334 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.46■□□□□ 0.07
GABREP78334 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.46■□□□□ 0.07
GABREP78334 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
GABREP78334 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
GABREP78334 LINC02012-201ENST00000608206 1725 ntBASIC15.46■□□□□ 0.07
GABREP78334 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.46■□□□□ 0.07
GABREP78334 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 C8orf49-201ENST00000525043 1968 ntBASIC15.46■□□□□ 0.07
GABREP78334 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.46■□□□□ 0.07
GABREP78334 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.46■□□□□ 0.07
GABREP78334 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
GABREP78334 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
GABREP78334 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.46■□□□□ 0.07
GABREP78334 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GABREP78334 SPDYE17-201ENST00000412399 783 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms