Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.2■□□□□ 0.34
USP46P62068 RNA5SP410-201ENST00000516285 106 ntBASIC17.2■□□□□ 0.34
USP46P62068 AC069120.2-201ENST00000524091 540 ntBASIC17.2■□□□□ 0.34
USP46P62068 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.2■□□□□ 0.34
USP46P62068 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
USP46P62068 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.2■□□□□ 0.34
USP46P62068 BANF1P1-201ENST00000553684 263 ntBASIC17.2■□□□□ 0.34
USP46P62068 RN7SL602P-201ENST00000578326 324 ntBASIC17.2■□□□□ 0.34
USP46P62068 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.2■□□□□ 0.34
USP46P62068 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 AC007967.4-201ENST00000614700 386 ntBASIC17.2■□□□□ 0.34
USP46P62068 AL390754.1-201ENST00000619088 582 ntBASIC17.2■□□□□ 0.34
USP46P62068 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP46P62068 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.2■□□□□ 0.34
USP46P62068 AL589702.1-201ENST00000641229 1509 ntBASIC17.2■□□□□ 0.34
USP46P62068 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
USP46P62068 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
USP46P62068 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
USP46P62068 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
USP46P62068 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.19■□□□□ 0.34
USP46P62068 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.19■□□□□ 0.34
USP46P62068 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.19■□□□□ 0.34
USP46P62068 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.19■□□□□ 0.34
USP46P62068 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.19■□□□□ 0.34
USP46P62068 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.19■□□□□ 0.34
USP46P62068 AGGF1P2-201ENST00000426656 2106 ntBASIC17.19■□□□□ 0.34
USP46P62068 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.19■□□□□ 0.34
USP46P62068 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.19■□□□□ 0.34
USP46P62068 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.19■□□□□ 0.34
USP46P62068 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.19■□□□□ 0.34
USP46P62068 AL158211.3-201ENST00000607385 239 ntBASIC17.19■□□□□ 0.34
USP46P62068 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
USP46P62068 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
USP46P62068 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.19■□□□□ 0.34
USP46P62068 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
USP46P62068 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.19■□□□□ 0.34
USP46P62068 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.19■□□□□ 0.34
USP46P62068 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.19■□□□□ 0.34
USP46P62068 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
USP46P62068 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP46P62068 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.18■□□□□ 0.34
USP46P62068 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
USP46P62068 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.18■□□□□ 0.34
USP46P62068 UGT1A2P-201ENST00000454886 866 ntBASIC17.18■□□□□ 0.34
USP46P62068 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP46P62068 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP46P62068 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP46P62068 IGHV3-42-201ENST00000520410 361 ntBASIC17.18■□□□□ 0.34
USP46P62068 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.18■□□□□ 0.34
USP46P62068 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.18■□□□□ 0.34
USP46P62068 AC092364.2-202ENST00000597012 1073 ntBASIC17.18■□□□□ 0.34
USP46P62068 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.18■□□□□ 0.34
USP46P62068 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP46P62068 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
USP46P62068 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP46P62068 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.18■□□□□ 0.34
USP46P62068 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP46P62068 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP46P62068 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
USP46P62068 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
USP46P62068 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP46P62068 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
USP46P62068 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP46P62068 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USP46P62068 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
USP46P62068 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USP46P62068 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP46P62068 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.17■□□□□ 0.34
USP46P62068 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP46P62068 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.17■□□□□ 0.34
USP46P62068 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms