Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 AC006449.6-201ENST00000612330 2296 ntBASIC21.32■■□□□ 1
RIPK4P57078 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC21.32■■□□□ 1
RIPK4P57078 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.32■■□□□ 1
RIPK4P57078 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC21.32■■□□□ 1
RIPK4P57078 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.32■■□□□ 1
RIPK4P57078 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.32■■□□□ 1
RIPK4P57078 AC092580.3-201ENST00000430932 139 ntBASIC21.32■■□□□ 1
RIPK4P57078 AC055876.3-201ENST00000431496 288 ntBASIC21.32■■□□□ 1
RIPK4P57078 HMGN1P19-201ENST00000436976 333 ntBASIC21.32■■□□□ 1
RIPK4P57078 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.32■■□□□ 1
RIPK4P57078 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.32■■□□□ 1
RIPK4P57078 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.32■■□□□ 1
RIPK4P57078 AC097493.3-201ENST00000509725 367 ntBASIC21.32■■□□□ 1
RIPK4P57078 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 AC069120.2-201ENST00000524091 540 ntBASIC21.32■■□□□ 1
RIPK4P57078 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.32■■□□□ 1
RIPK4P57078 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.32■■□□□ 1
RIPK4P57078 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.32■■□□□ 1
RIPK4P57078 AC138649.4-201ENST00000612222 287 ntBASIC21.32■■□□□ 1
RIPK4P57078 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.32■■□□□ 1
RIPK4P57078 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RIPK4P57078 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 AL118508.1-201ENST00000613502 2345 ntBASIC21.32■■□□□ 1
RIPK4P57078 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC21.32■■□□□ 1
RIPK4P57078 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RIPK4P57078 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RIPK4P57078 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RIPK4P57078 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.31■■□□□ 1
RIPK4P57078 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.31■■□□□ 1
RIPK4P57078 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RIPK4P57078 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
RIPK4P57078 AC006449.5-201ENST00000610658 2098 ntBASIC21.31■■□□□ 1
RIPK4P57078 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.31■■□□□ 1
RIPK4P57078 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIPK4P57078 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.31■■□□□ 1
RIPK4P57078 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21.3■■□□□ 1
RIPK4P57078 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.3■■□□□ 1
RIPK4P57078 MIR770-201ENST00000390219 98 ntBASIC21.3■■□□□ 1
RIPK4P57078 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RIPK4P57078 MTND6P24-201ENST00000440466 518 ntBASIC21.3■■□□□ 1
RIPK4P57078 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
RIPK4P57078 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.3■■□□□ 1
RIPK4P57078 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 AL035456.1-201ENST00000456064 1369 ntBASIC21.3■■□□□ 1
RIPK4P57078 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 AC008894.3-201ENST00000624324 3103 ntBASIC21.3■■□□□ 1
RIPK4P57078 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.3■■□□□ 1
RIPK4P57078 AC046158.3-201ENST00000624947 2558 ntBASIC21.3■■□□□ 1
RIPK4P57078 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
RIPK4P57078 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK4P57078 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK4P57078 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC21.29■■□□□ 1
RIPK4P57078 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK4P57078 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK4P57078 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RIPK4P57078 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK4P57078 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK4P57078 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RIPK4P57078 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RIPK4P57078 PCDHB19P-201ENST00000570871 2371 ntBASIC21.29■■□□□ 1
RIPK4P57078 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.29■■□□□ 1
RIPK4P57078 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.29■■□□□ 1
RIPK4P57078 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.29■■□□□ 1
RIPK4P57078 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.29■■□□□ 1
RIPK4P57078 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms