Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CMC4P56277 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.17□□□□□ -0.46
CMC4P56277 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 AC106820.2-201ENST00000563775 3264 ntBASIC12.17□□□□□ -0.46
CMC4P56277 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CMC4P56277 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.17□□□□□ -0.46
CMC4P56277 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.16□□□□□ -0.46
CMC4P56277 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CMC4P56277 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.16□□□□□ -0.46
CMC4P56277 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.16□□□□□ -0.46
CMC4P56277 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CMC4P56277 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CMC4P56277 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CMC4P56277 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.16□□□□□ -0.46
CMC4P56277 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 RNF216P1-203ENST00000404404 2427 ntBASIC12.16□□□□□ -0.46
CMC4P56277 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CMC4P56277 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CMC4P56277 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
CMC4P56277 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.16□□□□□ -0.46
CMC4P56277 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CMC4P56277 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
CMC4P56277 AC142381.1-201ENST00000426099 345 ntBASIC12.16□□□□□ -0.46
CMC4P56277 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 HLA-J-203ENST00000494367 1087 ntBASIC12.16□□□□□ -0.46
CMC4P56277 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.16□□□□□ -0.46
CMC4P56277 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.16□□□□□ -0.46
CMC4P56277 SLC25A39P2-201ENST00000537614 270 ntBASIC12.16□□□□□ -0.46
CMC4P56277 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CMC4P56277 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.16□□□□□ -0.46
CMC4P56277 MIR4321-201ENST00000592276 80 ntBASIC12.16□□□□□ -0.46
CMC4P56277 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.16□□□□□ -0.46
CMC4P56277 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.16□□□□□ -0.46
CMC4P56277 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.16□□□□□ -0.46
CMC4P56277 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.16□□□□□ -0.46
CMC4P56277 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 NORAD-201ENST00000565493 5339 ntBASIC12.16□□□□□ -0.46
CMC4P56277 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.16□□□□□ -0.46
CMC4P56277 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CMC4P56277 AL035456.1-201ENST00000456064 1369 ntBASIC12.16□□□□□ -0.46
CMC4P56277 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.16□□□□□ -0.46
CMC4P56277 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CMC4P56277 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.15□□□□□ -0.46
CMC4P56277 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CMC4P56277 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CMC4P56277 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.15□□□□□ -0.46
CMC4P56277 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.15□□□□□ -0.46
CMC4P56277 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms