Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH13P55290 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH13P55290 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 AC108751.1-201ENST00000490852 363 ntBASIC16.03■□□□□ 0.16
CDH13P55290 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CDH13P55290 AL160237.2-201ENST00000556165 472 ntBASIC16.03■□□□□ 0.16
CDH13P55290 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH13P55290 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 AL031008.1-201ENST00000619963 541 ntBASIC16.03■□□□□ 0.16
CDH13P55290 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDH13P55290 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 AL592424.1-201ENST00000563624 1536 ntBASIC16.03■□□□□ 0.16
CDH13P55290 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH13P55290 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH13P55290 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH13P55290 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH13P55290 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CDH13P55290 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH13P55290 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH13P55290 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.02■□□□□ 0.16
CDH13P55290 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.02■□□□□ 0.16
CDH13P55290 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.02■□□□□ 0.16
CDH13P55290 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CDH13P55290 AL513480.1-201ENST00000451731 511 ntBASIC16.02■□□□□ 0.16
CDH13P55290 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH13P55290 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH13P55290 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.02■□□□□ 0.16
CDH13P55290 AL031055.1-201ENST00000606362 631 ntBASIC16.02■□□□□ 0.16
CDH13P55290 MIR7706-201ENST00000613747 67 ntBASIC16.02■□□□□ 0.16
CDH13P55290 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDH13P55290 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDH13P55290 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDH13P55290 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH13P55290 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH13P55290 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH13P55290 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CDH13P55290 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.02■□□□□ 0.15
CDH13P55290 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.02■□□□□ 0.15
CDH13P55290 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH13P55290 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.02■□□□□ 0.15
CDH13P55290 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH13P55290 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH13P55290 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH13P55290 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.02■□□□□ 0.15
CDH13P55290 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CDH13P55290 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CDH13P55290 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
CDH13P55290 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH13P55290 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
CDH13P55290 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH13P55290 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH13P55290 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH13P55290 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH13P55290 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH13P55290 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CDH13P55290 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH13P55290 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH13P55290 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDH13P55290 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH13P55290 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH13P55290 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH13P55290 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH13P55290 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.01■□□□□ 0.15
CDH13P55290 AL031284.1-201ENST00000419297 478 ntBASIC16.01■□□□□ 0.15
CDH13P55290 AC098831.1-202ENST00000438821 336 ntBASIC16.01■□□□□ 0.15
CDH13P55290 PRSS29P-201ENST00000440800 595 ntBASIC16.01■□□□□ 0.15
CDH13P55290 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH13P55290 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH13P55290 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms