Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ATN1P54259 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ATN1P54259 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.93■□□□□ 0.46
ATN1P54259 MIR5189-201ENST00000577370 114 ntBASIC17.93■□□□□ 0.46
ATN1P54259 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.93■□□□□ 0.46
ATN1P54259 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.93■□□□□ 0.46
ATN1P54259 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATN1P54259 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATN1P54259 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.93■□□□□ 0.46
ATN1P54259 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ATN1P54259 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ATN1P54259 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ATN1P54259 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ATN1P54259 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ATN1P54259 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.92■□□□□ 0.46
ATN1P54259 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.92■□□□□ 0.46
ATN1P54259 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.92■□□□□ 0.46
ATN1P54259 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ATN1P54259 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.92■□□□□ 0.46
ATN1P54259 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.92■□□□□ 0.46
ATN1P54259 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.92■□□□□ 0.46
ATN1P54259 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.92■□□□□ 0.46
ATN1P54259 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.92■□□□□ 0.46
ATN1P54259 RNA5SP412-201ENST00000516234 123 ntBASIC17.92■□□□□ 0.46
ATN1P54259 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.92■□□□□ 0.46
ATN1P54259 MIR3615-201ENST00000581999 87 ntBASIC17.92■□□□□ 0.46
ATN1P54259 AC243960.2-201ENST00000600996 747 ntBASIC17.92■□□□□ 0.46
ATN1P54259 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.92■□□□□ 0.46
ATN1P54259 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATN1P54259 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ATN1P54259 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.91■□□□□ 0.46
ATN1P54259 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
ATN1P54259 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.91■□□□□ 0.46
ATN1P54259 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.91■□□□□ 0.46
ATN1P54259 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ATN1P54259 RN7SL371P-201ENST00000578099 267 ntBASIC17.91■□□□□ 0.46
ATN1P54259 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC17.91■□□□□ 0.46
ATN1P54259 AC133539.2-201ENST00000604757 467 ntBASIC17.91■□□□□ 0.46
ATN1P54259 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC17.91■□□□□ 0.46
ATN1P54259 AC009118.3-201ENST00000622896 873 ntBASIC17.91■□□□□ 0.46
ATN1P54259 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ATN1P54259 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ATN1P54259 PCDHB17P-201ENST00000539533 2393 ntBASIC17.91■□□□□ 0.46
ATN1P54259 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ATN1P54259 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ATN1P54259 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ATN1P54259 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ATN1P54259 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
ATN1P54259 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.91■□□□□ 0.46
ATN1P54259 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.91■□□□□ 0.46
ATN1P54259 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATN1P54259 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ATN1P54259 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.9■□□□□ 0.46
ATN1P54259 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
ATN1P54259 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATN1P54259 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.9■□□□□ 0.46
ATN1P54259 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATN1P54259 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms