Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
NUBP1P53384 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.3■□□□□ 0.2
NUBP1P53384 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NUBP1P53384 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 ATP5F1P6-201ENST00000402768 767 ntBASIC16.3■□□□□ 0.2
NUBP1P53384 HINT2P1-201ENST00000419438 481 ntBASIC16.3■□□□□ 0.2
NUBP1P53384 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC16.3■□□□□ 0.2
NUBP1P53384 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.3■□□□□ 0.2
NUBP1P53384 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.3■□□□□ 0.2
NUBP1P53384 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
NUBP1P53384 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.3■□□□□ 0.2
NUBP1P53384 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.3■□□□□ 0.2
NUBP1P53384 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.3■□□□□ 0.2
NUBP1P53384 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.3■□□□□ 0.2
NUBP1P53384 AP005597.1-201ENST00000534192 802 ntBASIC16.3■□□□□ 0.2
NUBP1P53384 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC16.3■□□□□ 0.2
NUBP1P53384 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.3■□□□□ 0.2
NUBP1P53384 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC16.3■□□□□ 0.2
NUBP1P53384 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC16.3■□□□□ 0.2
NUBP1P53384 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.3■□□□□ 0.2
NUBP1P53384 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NUBP1P53384 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.3■□□□□ 0.2
NUBP1P53384 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.3■□□□□ 0.2
NUBP1P53384 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.3■□□□□ 0.2
NUBP1P53384 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.3■□□□□ 0.2
NUBP1P53384 AC025048.3-201ENST00000590609 569 ntBASIC16.3■□□□□ 0.2
NUBP1P53384 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.3■□□□□ 0.2
NUBP1P53384 AC020765.3-201ENST00000613051 740 ntBASIC16.3■□□□□ 0.2
NUBP1P53384 AC005702.4-201ENST00000618393 416 ntBASIC16.3■□□□□ 0.2
NUBP1P53384 AC009269.6-201ENST00000621778 588 ntBASIC16.3■□□□□ 0.2
NUBP1P53384 MAPK10-350ENST00000641777 965 ntBASIC16.3■□□□□ 0.2
NUBP1P53384 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NUBP1P53384 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.3■□□□□ 0.2
NUBP1P53384 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.29■□□□□ 0.2
NUBP1P53384 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NUBP1P53384 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NUBP1P53384 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NUBP1P53384 AC023050.4-201ENST00000538830 1380 ntBASIC16.29■□□□□ 0.2
NUBP1P53384 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NUBP1P53384 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NUBP1P53384 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
NUBP1P53384 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC16.29■□□□□ 0.2
NUBP1P53384 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.29■□□□□ 0.2
NUBP1P53384 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.29■□□□□ 0.2
NUBP1P53384 ZNF736P8Y-201ENST00000451913 669 ntBASIC16.29■□□□□ 0.2
NUBP1P53384 LDHBP1-201ENST00000455730 1119 ntBASIC16.29■□□□□ 0.2
NUBP1P53384 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC16.29■□□□□ 0.2
NUBP1P53384 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC16.29■□□□□ 0.2
NUBP1P53384 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 SCARNA20.5-201ENST00000516991 142 ntBASIC16.29■□□□□ 0.2
NUBP1P53384 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC16.29■□□□□ 0.2
NUBP1P53384 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC16.29■□□□□ 0.2
NUBP1P53384 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC16.29■□□□□ 0.2
NUBP1P53384 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.29■□□□□ 0.2
NUBP1P53384 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 AC023310.1-201ENST00000554836 735 ntBASIC16.29■□□□□ 0.2
NUBP1P53384 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.29■□□□□ 0.2
NUBP1P53384 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.29■□□□□ 0.2
NUBP1P53384 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.29■□□□□ 0.2
NUBP1P53384 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
NUBP1P53384 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.29■□□□□ 0.2
NUBP1P53384 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.29■□□□□ 0.2
NUBP1P53384 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.29■□□□□ 0.2
NUBP1P53384 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NUBP1P53384 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.28■□□□□ 0.2
NUBP1P53384 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NUBP1P53384 SNTG1-202ENST00000518864 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms