Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NEDD4P46934 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 CNN2P2-201ENST00000443536 909 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 CNN2P3-201ENST00000450201 906 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.18■□□□□ 0.66
NEDD4P46934 RFPL4AP1-201ENST00000530883 850 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 AC025678.2-201ENST00000562061 970 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 AC051619.7-201ENST00000568314 623 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 AC015911.4-201ENST00000588022 1070 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.18■□□□□ 0.66
NEDD4P46934 AC003101.2-201ENST00000612557 442 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 AC106028.4-201ENST00000614509 607 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 AC007967.4-201ENST00000614700 386 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 AL136317.3-201ENST00000618497 906 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.18■□□□□ 0.66
NEDD4P46934 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.18■□□□□ 0.66
NEDD4P46934 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.18■□□□□ 0.66
NEDD4P46934 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
NEDD4P46934 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.18■□□□□ 0.66
NEDD4P46934 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.17■□□□□ 0.66
NEDD4P46934 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NEDD4P46934 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.17■□□□□ 0.66
NEDD4P46934 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NEDD4P46934 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NEDD4P46934 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NEDD4P46934 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.17■□□□□ 0.66
NEDD4P46934 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NEDD4P46934 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.17■□□□□ 0.66
NEDD4P46934 SPDYE7P-202ENST00000420373 878 ntBASIC19.17■□□□□ 0.66
NEDD4P46934 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.17■□□□□ 0.66
NEDD4P46934 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.17■□□□□ 0.66
NEDD4P46934 AC024267.1-201ENST00000582320 895 ntBASIC19.17■□□□□ 0.66
NEDD4P46934 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NEDD4P46934 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NEDD4P46934 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD4P46934 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.16■□□□□ 0.66
NEDD4P46934 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.16■□□□□ 0.66
NEDD4P46934 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NEDD4P46934 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.16■□□□□ 0.66
NEDD4P46934 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NEDD4P46934 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NEDD4P46934 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.16■□□□□ 0.66
NEDD4P46934 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.16■□□□□ 0.66
NEDD4P46934 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.16■□□□□ 0.66
NEDD4P46934 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.16■□□□□ 0.66
NEDD4P46934 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.16■□□□□ 0.66
NEDD4P46934 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.16■□□□□ 0.66
NEDD4P46934 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.16■□□□□ 0.66
NEDD4P46934 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.16■□□□□ 0.66
NEDD4P46934 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.16■□□□□ 0.66
NEDD4P46934 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NEDD4P46934 TUBB3P1-201ENST00000405796 1332 ntBASIC19.16■□□□□ 0.66
NEDD4P46934 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD4P46934 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.15■□□□□ 0.66
NEDD4P46934 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.15■□□□□ 0.66
NEDD4P46934 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.15■□□□□ 0.66
NEDD4P46934 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms