Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA4P43681 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA4P43681 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA4P43681 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA4P43681 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA4P43681 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA4P43681 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.48■□□□□ 0.23
CHRNA4P43681 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA4P43681 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHRNA4P43681 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA4P43681 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHRNA4P43681 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA4P43681 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA4P43681 SPCS2P4-201ENST00000436160 681 ntBASIC16.48■□□□□ 0.23
CHRNA4P43681 MKNK2P1-201ENST00000437526 628 ntBASIC16.48■□□□□ 0.23
CHRNA4P43681 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.48■□□□□ 0.23
CHRNA4P43681 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRNA4P43681 AC079140.1-201ENST00000508039 487 ntBASIC16.48■□□□□ 0.23
CHRNA4P43681 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRNA4P43681 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRNA4P43681 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA4P43681 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA4P43681 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
CHRNA4P43681 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA4P43681 AC027307.2-201ENST00000591252 911 ntBASIC16.48■□□□□ 0.23
CHRNA4P43681 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRNA4P43681 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA4P43681 AC026120.1-201ENST00000611536 926 ntBASIC16.48■□□□□ 0.23
CHRNA4P43681 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CHRNA4P43681 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
CHRNA4P43681 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA4P43681 ELL2P1-201ENST00000413990 1906 ntBASIC16.48■□□□□ 0.23
CHRNA4P43681 PAUPAR-201ENST00000630360 2965 ntBASIC16.48■□□□□ 0.23
CHRNA4P43681 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNA4P43681 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA4P43681 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA4P43681 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA4P43681 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
CHRNA4P43681 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNA4P43681 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CHRNA4P43681 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRNA4P43681 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNA4P43681 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA4P43681 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CHRNA4P43681 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA4P43681 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA4P43681 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA4P43681 GPX1P2-201ENST00000429271 606 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA4P43681 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNA4P43681 SPDYE11-202ENST00000450699 704 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 CEND1P1-201ENST00000451006 455 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 AC112482.1-201ENST00000492080 688 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 FAM86C2P-203ENST00000528684 1004 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNA4P43681 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.47■□□□□ 0.23
CHRNA4P43681 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.47■□□□□ 0.23
CHRNA4P43681 AC005829.1-201ENST00000570002 483 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 SPDYE9P-201ENST00000570642 692 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 MIR4469-201ENST00000583919 79 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA4P43681 SPDYE10P-202ENST00000612005 668 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 SPDYE8P-202ENST00000612377 668 ntBASIC16.47■□□□□ 0.23
CHRNA4P43681 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CHRNA4P43681 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA4P43681 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA4P43681 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CHRNA4P43681 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.47■□□□□ 0.23
CHRNA4P43681 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CHRNA4P43681 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA4P43681 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.47■□□□□ 0.23
CHRNA4P43681 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHRNA4P43681 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHRNA4P43681 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNA4P43681 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CHRNA4P43681 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA4P43681 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA4P43681 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA4P43681 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA4P43681 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA4P43681 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms