Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.48■□□□□ 0.39
SSR1P43307 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.48■□□□□ 0.39
SSR1P43307 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.48■□□□□ 0.39
SSR1P43307 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.48■□□□□ 0.39
SSR1P43307 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.48■□□□□ 0.39
SSR1P43307 AC117500.6-201ENST00000624871 588 ntBASIC17.48■□□□□ 0.39
SSR1P43307 FAM215A-202ENST00000632077 792 ntBASIC17.48■□□□□ 0.39
SSR1P43307 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.48■□□□□ 0.39
SSR1P43307 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.47■□□□□ 0.39
SSR1P43307 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.47■□□□□ 0.39
SSR1P43307 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 AL513523.2-202ENST00000427283 2040 ntBASIC17.47■□□□□ 0.39
SSR1P43307 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SSR1P43307 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SSR1P43307 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.47■□□□□ 0.39
SSR1P43307 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.47■□□□□ 0.39
SSR1P43307 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.47■□□□□ 0.39
SSR1P43307 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.47■□□□□ 0.39
SSR1P43307 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.47■□□□□ 0.39
SSR1P43307 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.47■□□□□ 0.39
SSR1P43307 AL773604.1-201ENST00000617417 272 ntBASIC17.47■□□□□ 0.39
SSR1P43307 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.47■□□□□ 0.39
SSR1P43307 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.47■□□□□ 0.39
SSR1P43307 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.47■□□□□ 0.39
SSR1P43307 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.47■□□□□ 0.39
SSR1P43307 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.47■□□□□ 0.39
SSR1P43307 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
SSR1P43307 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SSR1P43307 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SSR1P43307 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.47■□□□□ 0.39
SSR1P43307 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SSR1P43307 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SSR1P43307 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSR1P43307 GGT4P-201ENST00000623672 1708 ntBASIC17.47■□□□□ 0.39
SSR1P43307 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.46■□□□□ 0.39
SSR1P43307 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SSR1P43307 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.46■□□□□ 0.39
SSR1P43307 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.46■□□□□ 0.39
SSR1P43307 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.46■□□□□ 0.39
SSR1P43307 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.46■□□□□ 0.39
SSR1P43307 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.46■□□□□ 0.39
SSR1P43307 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.46■□□□□ 0.39
SSR1P43307 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SSR1P43307 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.46■□□□□ 0.39
SSR1P43307 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms