Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
TNFSF9P41273 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TNFSF9P41273 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.62■□□□□ 0.41
TNFSF9P41273 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 AC097493.3-201ENST00000509725 367 ntBASIC17.62■□□□□ 0.41
TNFSF9P41273 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.62■□□□□ 0.41
TNFSF9P41273 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFSF9P41273 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFSF9P41273 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.62■□□□□ 0.41
TNFSF9P41273 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TNFSF9P41273 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF9P41273 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFSF9P41273 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TNFSF9P41273 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TNFSF9P41273 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TNFSF9P41273 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.61■□□□□ 0.41
TNFSF9P41273 MIR770-201ENST00000390219 98 ntBASIC17.61■□□□□ 0.41
TNFSF9P41273 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFSF9P41273 AC055876.3-201ENST00000431496 288 ntBASIC17.61■□□□□ 0.41
TNFSF9P41273 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.61■□□□□ 0.41
TNFSF9P41273 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TNFSF9P41273 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFSF9P41273 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFSF9P41273 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TNFSF9P41273 AC138649.4-201ENST00000612222 287 ntBASIC17.61■□□□□ 0.41
TNFSF9P41273 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TNFSF9P41273 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TNFSF9P41273 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TNFSF9P41273 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFSF9P41273 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 AL136982.4-201ENST00000437689 1740 ntBASIC17.61■□□□□ 0.41
TNFSF9P41273 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
TNFSF9P41273 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFSF9P41273 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TNFSF9P41273 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFSF9P41273 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFSF9P41273 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TNFSF9P41273 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFSF9P41273 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFSF9P41273 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFSF9P41273 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFSF9P41273 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.6■□□□□ 0.41
TNFSF9P41273 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFSF9P41273 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.6■□□□□ 0.41
TNFSF9P41273 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFSF9P41273 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TNFSF9P41273 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFSF9P41273 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.6■□□□□ 0.41
TNFSF9P41273 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TNFSF9P41273 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFSF9P41273 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.6■□□□□ 0.41
TNFSF9P41273 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.6■□□□□ 0.41
TNFSF9P41273 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.6■□□□□ 0.41
TNFSF9P41273 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.6■□□□□ 0.41
TNFSF9P41273 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFSF9P41273 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.6■□□□□ 0.41
TNFSF9P41273 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms