Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 KRT16P4-201ENST00000453883 522 ntBASIC14.31□□□□□ -0.12
GDNFP39905 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.31□□□□□ -0.12
GDNFP39905 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.31□□□□□ -0.12
GDNFP39905 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.31□□□□□ -0.12
GDNFP39905 AC013467.2-201ENST00000605472 835 ntBASIC14.31□□□□□ -0.12
GDNFP39905 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
GDNFP39905 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.31□□□□□ -0.12
GDNFP39905 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.31□□□□□ -0.12
GDNFP39905 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GDNFP39905 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.31□□□□□ -0.12
GDNFP39905 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GDNFP39905 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.3□□□□□ -0.12
GDNFP39905 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GDNFP39905 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.3□□□□□ -0.12
GDNFP39905 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.3□□□□□ -0.12
GDNFP39905 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GDNFP39905 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GDNFP39905 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
GDNFP39905 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 AC003669.1-201ENST00000334569 611 ntBASIC14.3□□□□□ -0.12
GDNFP39905 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GDNFP39905 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 TSPY19P-201ENST00000418461 509 ntBASIC14.3□□□□□ -0.12
GDNFP39905 TSPY18P-201ENST00000441642 509 ntBASIC14.3□□□□□ -0.12
GDNFP39905 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.3□□□□□ -0.12
GDNFP39905 KRT18P31-201ENST00000506277 1292 ntBASIC14.3□□□□□ -0.12
GDNFP39905 KRT18P56-201ENST00000507275 550 ntBASIC14.3□□□□□ -0.12
GDNFP39905 PRELID1P1-202ENST00000567272 903 ntBASIC14.3□□□□□ -0.12
GDNFP39905 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.3□□□□□ -0.12
GDNFP39905 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.3□□□□□ -0.12
GDNFP39905 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.3□□□□□ -0.12
GDNFP39905 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.3□□□□□ -0.12
GDNFP39905 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.3□□□□□ -0.12
GDNFP39905 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GDNFP39905 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GDNFP39905 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
GDNFP39905 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
GDNFP39905 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
GDNFP39905 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
GDNFP39905 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.29□□□□□ -0.12
GDNFP39905 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GDNFP39905 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GDNFP39905 AL671710.1-201ENST00000610245 2349 ntBASIC14.29□□□□□ -0.12
GDNFP39905 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
GDNFP39905 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDNFP39905 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.29□□□□□ -0.12
GDNFP39905 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms