Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HMGCLP35914 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HMGCLP35914 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HMGCLP35914 MIR648-201ENST00000385046 94 ntBASIC16.24■□□□□ 0.19
HMGCLP35914 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGCLP35914 RBPMS2P1-201ENST00000437762 623 ntBASIC16.24■□□□□ 0.19
HMGCLP35914 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.24■□□□□ 0.19
HMGCLP35914 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.24■□□□□ 0.19
HMGCLP35914 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
HMGCLP35914 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
HMGCLP35914 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.24■□□□□ 0.19
HMGCLP35914 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.24■□□□□ 0.19
HMGCLP35914 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGCLP35914 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HMGCLP35914 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HMGCLP35914 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.24■□□□□ 0.19
HMGCLP35914 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGCLP35914 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCLP35914 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.23■□□□□ 0.19
HMGCLP35914 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HMGCLP35914 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HMGCLP35914 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.23■□□□□ 0.19
HMGCLP35914 AC026691.1-201ENST00000602502 2017 ntBASIC16.23■□□□□ 0.19
HMGCLP35914 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
HMGCLP35914 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HMGCLP35914 HLA-J-203ENST00000494367 1087 ntBASIC16.23■□□□□ 0.19
HMGCLP35914 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.23■□□□□ 0.19
HMGCLP35914 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.23■□□□□ 0.19
HMGCLP35914 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.23■□□□□ 0.19
HMGCLP35914 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HMGCLP35914 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.23■□□□□ 0.19
HMGCLP35914 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.23■□□□□ 0.19
HMGCLP35914 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.23■□□□□ 0.19
HMGCLP35914 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.23■□□□□ 0.19
HMGCLP35914 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMGCLP35914 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGCLP35914 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HMGCLP35914 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HMGCLP35914 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HMGCLP35914 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGCLP35914 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGCLP35914 SPDYE14P-201ENST00000442619 822 ntBASIC16.22■□□□□ 0.19
HMGCLP35914 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGCLP35914 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGCLP35914 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGCLP35914 AL512356.2-201ENST00000546955 174 ntBASIC16.22■□□□□ 0.19
HMGCLP35914 AC026150.2-201ENST00000564693 1156 ntBASIC16.22■□□□□ 0.19
HMGCLP35914 AP001059.3-201ENST00000619053 235 ntBASIC16.22■□□□□ 0.19
HMGCLP35914 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGCLP35914 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.22■□□□□ 0.19
HMGCLP35914 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGCLP35914 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms