Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN1P35523 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN1P35523 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN1P35523 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN1P35523 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCN1P35523 AC006449.6-201ENST00000612330 2296 ntBASIC18.66■□□□□ 0.58
CLCN1P35523 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 AC132938.5-201ENST00000624980 1813 ntBASIC18.66■□□□□ 0.58
CLCN1P35523 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN1P35523 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN1P35523 HLA-J-202ENST00000469281 1241 ntBASIC18.66■□□□□ 0.58
CLCN1P35523 LINC02447-202ENST00000501888 2146 ntBASIC18.66■□□□□ 0.58
CLCN1P35523 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLCN1P35523 AC111152.3-201ENST00000569699 673 ntBASIC18.66■□□□□ 0.58
CLCN1P35523 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.66■□□□□ 0.58
CLCN1P35523 AC092329.2-201ENST00000598402 547 ntBASIC18.66■□□□□ 0.58
CLCN1P35523 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCN1P35523 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN1P35523 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLCN1P35523 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLCN1P35523 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN1P35523 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN1P35523 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLCN1P35523 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN1P35523 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCN1P35523 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLCN1P35523 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLCN1P35523 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLCN1P35523 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLCN1P35523 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 EGFEM1P-202ENST00000431685 1563 ntBASIC18.65■□□□□ 0.58
CLCN1P35523 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.65■□□□□ 0.58
CLCN1P35523 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLCN1P35523 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCN1P35523 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCN1P35523 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.65■□□□□ 0.58
CLCN1P35523 AC096582.2-201ENST00000510860 516 ntBASIC18.65■□□□□ 0.58
CLCN1P35523 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCN1P35523 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.65■□□□□ 0.58
CLCN1P35523 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.65■□□□□ 0.58
CLCN1P35523 AC012615.1-201ENST00000565797 1299 ntBASIC18.65■□□□□ 0.58
CLCN1P35523 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CLCN1P35523 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCN1P35523 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLCN1P35523 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.65■□□□□ 0.58
CLCN1P35523 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.65■□□□□ 0.58
CLCN1P35523 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCN1P35523 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
CLCN1P35523 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CLCN1P35523 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN1P35523 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.64■□□□□ 0.58
CLCN1P35523 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC18.64■□□□□ 0.58
CLCN1P35523 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLCN1P35523 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CLCN1P35523 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLCN1P35523 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCN1P35523 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CLCN1P35523 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.64■□□□□ 0.57
CLCN1P35523 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.64■□□□□ 0.57
CLCN1P35523 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.64■□□□□ 0.57
CLCN1P35523 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.64■□□□□ 0.57
CLCN1P35523 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLCN1P35523 AC104819.1-201ENST00000504587 486 ntBASIC18.64■□□□□ 0.57
CLCN1P35523 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms