Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RORAP35398 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.53■□□□□ 0.08
RORAP35398 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 MIR661-201ENST00000384842 89 ntBASIC15.53■□□□□ 0.08
RORAP35398 AC241585.1-201ENST00000433527 519 ntBASIC15.53■□□□□ 0.08
RORAP35398 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.53■□□□□ 0.08
RORAP35398 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.53■□□□□ 0.08
RORAP35398 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.53■□□□□ 0.08
RORAP35398 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.53■□□□□ 0.08
RORAP35398 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 AC020765.3-201ENST00000613051 740 ntBASIC15.53■□□□□ 0.08
RORAP35398 SPDYE12P-201ENST00000618416 771 ntBASIC15.53■□□□□ 0.08
RORAP35398 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
RORAP35398 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.53■□□□□ 0.08
RORAP35398 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
RORAP35398 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
RORAP35398 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.52■□□□□ 0.08
RORAP35398 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.52■□□□□ 0.08
RORAP35398 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.52■□□□□ 0.08
RORAP35398 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.52■□□□□ 0.08
RORAP35398 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RORAP35398 AL035456.1-201ENST00000456064 1369 ntBASIC15.52■□□□□ 0.08
RORAP35398 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.52■□□□□ 0.08
RORAP35398 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.52■□□□□ 0.08
RORAP35398 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.52■□□□□ 0.08
RORAP35398 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RORAP35398 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.52■□□□□ 0.08
RORAP35398 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.52■□□□□ 0.08
RORAP35398 AL353705.2-201ENST00000428243 662 ntBASIC15.52■□□□□ 0.08
RORAP35398 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.52■□□□□ 0.08
RORAP35398 AC002472.2-201ENST00000442739 958 ntBASIC15.52■□□□□ 0.08
RORAP35398 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 AC093724.1-201ENST00000448659 1027 ntBASIC15.52■□□□□ 0.08
RORAP35398 TSPY16P-201ENST00000449843 468 ntBASIC15.52■□□□□ 0.08
RORAP35398 COX20P2-201ENST00000452636 358 ntBASIC15.52■□□□□ 0.08
RORAP35398 AC004890.2-204ENST00000481968 304 ntBASIC15.52■□□□□ 0.08
RORAP35398 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RORAP35398 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.52■□□□□ 0.08
RORAP35398 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.52■□□□□ 0.08
RORAP35398 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.52■□□□□ 0.08
RORAP35398 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RORAP35398 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.52■□□□□ 0.08
RORAP35398 RN7SL204P-201ENST00000582831 262 ntBASIC15.52■□□□□ 0.08
RORAP35398 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.52■□□□□ 0.08
RORAP35398 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.52■□□□□ 0.08
RORAP35398 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.52■□□□□ 0.08
RORAP35398 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RORAP35398 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RORAP35398 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RORAP35398 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.52■□□□□ 0.07
RORAP35398 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RORAP35398 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RORAP35398 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RORAP35398 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
RORAP35398 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.52■□□□□ 0.07
RORAP35398 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RORAP35398 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RORAP35398 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RORAP35398 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RORAP35398 GPAA1P2-202ENST00000606848 1787 ntBASIC15.52■□□□□ 0.07
RORAP35398 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.52■□□□□ 0.07
RORAP35398 AL031731.1-201ENST00000642131 2094 ntBASIC15.52■□□□□ 0.07
RORAP35398 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RORAP35398 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RORAP35398 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RORAP35398 AC100757.3-201ENST00000622361 1406 ntBASIC15.51■□□□□ 0.07
RORAP35398 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RORAP35398 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
RORAP35398 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RORAP35398 GGT4P-201ENST00000623672 1708 ntBASIC15.51■□□□□ 0.07
RORAP35398 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.51■□□□□ 0.07
RORAP35398 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RORAP35398 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RORAP35398 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
RORAP35398 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms