Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A4P31645 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A4P31645 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A4P31645 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A4P31645 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A4P31645 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A4P31645 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SLC6A4P31645 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A4P31645 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A4P31645 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A4P31645 TSSK5P-201ENST00000423978 907 ntBASIC16.71■□□□□ 0.27
SLC6A4P31645 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC6A4P31645 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.71■□□□□ 0.27
SLC6A4P31645 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SLC6A4P31645 UGT1A2P-201ENST00000454886 866 ntBASIC16.71■□□□□ 0.27
SLC6A4P31645 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A4P31645 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC6A4P31645 AL079307.3-201ENST00000556114 283 ntBASIC16.71■□□□□ 0.27
SLC6A4P31645 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC6A4P31645 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A4P31645 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A4P31645 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC6A4P31645 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A4P31645 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A4P31645 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A4P31645 CETN4P-206ENST00000642099 2168 ntBASIC16.71■□□□□ 0.27
SLC6A4P31645 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.26
SLC6A4P31645 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC6A4P31645 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC6A4P31645 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC6A4P31645 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC6A4P31645 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC6A4P31645 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SLC6A4P31645 AL080243.2-201ENST00000418783 582 ntBASIC16.7■□□□□ 0.26
SLC6A4P31645 AC241585.1-201ENST00000433527 519 ntBASIC16.7■□□□□ 0.26
SLC6A4P31645 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC6A4P31645 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC6A4P31645 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.7■□□□□ 0.26
SLC6A4P31645 TEX28P1-201ENST00000613479 1221 ntBASIC16.7■□□□□ 0.26
SLC6A4P31645 TEX28P2-201ENST00000617764 1221 ntBASIC16.7■□□□□ 0.26
SLC6A4P31645 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SLC6A4P31645 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC6A4P31645 AL136982.4-201ENST00000437689 1740 ntBASIC16.7■□□□□ 0.26
SLC6A4P31645 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC6A4P31645 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SLC6A4P31645 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SLC6A4P31645 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A4P31645 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC6A4P31645 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A4P31645 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A4P31645 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A4P31645 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC6A4P31645 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A4P31645 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 AC004890.2-204ENST00000481968 304 ntBASIC16.69■□□□□ 0.26
SLC6A4P31645 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 RNA5SP421-201ENST00000516864 134 ntBASIC16.69■□□□□ 0.26
SLC6A4P31645 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.69■□□□□ 0.26
SLC6A4P31645 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A4P31645 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.69■□□□□ 0.26
SLC6A4P31645 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A4P31645 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SLC6A4P31645 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC6A4P31645 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
SLC6A4P31645 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC6A4P31645 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
SLC6A4P31645 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A4P31645 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SLC6A4P31645 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A4P31645 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms