Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.03■□□□□ -0
SHC1P29353 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.03■□□□□ -0
SHC1P29353 FAM58CP-201ENST00000435741 640 ntBASIC15.03■□□□□ -0
SHC1P29353 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.03■□□□□ -0
SHC1P29353 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.03■□□□□ -0
SHC1P29353 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.03■□□□□ -0
SHC1P29353 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.03■□□□□ -0
SHC1P29353 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.03■□□□□ -0
SHC1P29353 AL009183.1-201ENST00000603760 355 ntBASIC15.03■□□□□ -0
SHC1P29353 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.03■□□□□ -0
SHC1P29353 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SHC1P29353 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.03■□□□□ -0
SHC1P29353 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.03■□□□□ -0
SHC1P29353 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.03■□□□□ -0
SHC1P29353 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SHC1P29353 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHC1P29353 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.02■□□□□ -0
SHC1P29353 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.02■□□□□ -0
SHC1P29353 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SHC1P29353 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.02■□□□□ -0
SHC1P29353 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SHC1P29353 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHC1P29353 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.02■□□□□ -0
SHC1P29353 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SHC1P29353 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHC1P29353 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHC1P29353 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SHC1P29353 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
SHC1P29353 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.02■□□□□ -0
SHC1P29353 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SHC1P29353 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHC1P29353 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHC1P29353 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SHC1P29353 GPX1P2-201ENST00000429271 606 ntBASIC15.02■□□□□ -0
SHC1P29353 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.02■□□□□ -0
SHC1P29353 AC099522.2-201ENST00000607001 744 ntBASIC15.02■□□□□ -0
SHC1P29353 AC092902.6-201ENST00000641783 218 ntBASIC15.02■□□□□ -0
SHC1P29353 AL139011.1-202ENST00000642063 584 ntBASIC15.02■□□□□ -0
SHC1P29353 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.02□□□□□ -0.01
SHC1P29353 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.02□□□□□ -0.01
SHC1P29353 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.02□□□□□ -0.01
SHC1P29353 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SHC1P29353 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.02□□□□□ -0.01
SHC1P29353 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SHC1P29353 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.02□□□□□ -0.01
SHC1P29353 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.02□□□□□ -0.01
SHC1P29353 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHC1P29353 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHC1P29353 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.02□□□□□ -0.01
SHC1P29353 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SHC1P29353 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHC1P29353 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.02□□□□□ -0.01
SHC1P29353 AC006538.1-201ENST00000567905 1585 ntBASIC15.02□□□□□ -0.01
SHC1P29353 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SHC1P29353 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHC1P29353 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.02□□□□□ -0.01
SHC1P29353 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHC1P29353 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SHC1P29353 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHC1P29353 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHC1P29353 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.01□□□□□ -0.01
SHC1P29353 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SHC1P29353 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.01□□□□□ -0.01
SHC1P29353 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SHC1P29353 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SHC1P29353 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SHC1P29353 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SHC1P29353 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.01□□□□□ -0.01
SHC1P29353 AC112482.1-201ENST00000492080 688 ntBASIC15.01□□□□□ -0.01
SHC1P29353 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.01□□□□□ -0.01
SHC1P29353 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SHC1P29353 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.01□□□□□ -0.01
SHC1P29353 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SHC1P29353 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.01□□□□□ -0.01
SHC1P29353 MTDHP5-201ENST00000598980 586 ntBASIC15.01□□□□□ -0.01
SHC1P29353 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHC1P29353 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.01□□□□□ -0.01
SHC1P29353 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms