Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.72■□□□□ 0.11
HTR1EP28566 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
HTR1EP28566 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.72■□□□□ 0.11
HTR1EP28566 AL353135.1-201ENST00000606729 504 ntBASIC15.72■□□□□ 0.11
HTR1EP28566 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.72■□□□□ 0.11
HTR1EP28566 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.72■□□□□ 0.11
HTR1EP28566 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.72■□□□□ 0.11
HTR1EP28566 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.72■□□□□ 0.11
HTR1EP28566 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
HTR1EP28566 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HTR1EP28566 PCGF3-213ENST00000620529 1899 ntBASIC15.71■□□□□ 0.11
HTR1EP28566 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.71■□□□□ 0.11
HTR1EP28566 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
HTR1EP28566 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.71■□□□□ 0.11
HTR1EP28566 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HTR1EP28566 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.71■□□□□ 0.11
HTR1EP28566 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.71■□□□□ 0.11
HTR1EP28566 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 AC005829.1-201ENST00000570002 483 ntBASIC15.71■□□□□ 0.11
HTR1EP28566 AC064836.3-201ENST00000607928 673 ntBASIC15.71■□□□□ 0.11
HTR1EP28566 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 AC005593.1-201ENST00000624894 515 ntBASIC15.71■□□□□ 0.11
HTR1EP28566 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HTR1EP28566 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
HTR1EP28566 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HTR1EP28566 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.71■□□□□ 0.11
HTR1EP28566 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
HTR1EP28566 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HTR1EP28566 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.71■□□□□ 0.1
HTR1EP28566 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HTR1EP28566 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.71■□□□□ 0.1
HTR1EP28566 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HTR1EP28566 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HTR1EP28566 AC092850.2-201ENST00000623821 2697 ntBASIC15.71■□□□□ 0.1
HTR1EP28566 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
HTR1EP28566 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.7■□□□□ 0.1
HTR1EP28566 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.7■□□□□ 0.1
HTR1EP28566 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.7■□□□□ 0.1
HTR1EP28566 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HTR1EP28566 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.7■□□□□ 0.1
HTR1EP28566 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HTR1EP28566 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HTR1EP28566 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.7■□□□□ 0.1
HTR1EP28566 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.7■□□□□ 0.1
HTR1EP28566 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.7■□□□□ 0.1
HTR1EP28566 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.7■□□□□ 0.1
HTR1EP28566 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
HTR1EP28566 MPDU1-223ENST00000582151 728 ntBASIC15.7■□□□□ 0.1
HTR1EP28566 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.7■□□□□ 0.1
HTR1EP28566 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.7■□□□□ 0.1
HTR1EP28566 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.7■□□□□ 0.1
HTR1EP28566 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HTR1EP28566 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.7■□□□□ 0.1
HTR1EP28566 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HTR1EP28566 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.7■□□□□ 0.1
HTR1EP28566 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
HTR1EP28566 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTR1EP28566 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTR1EP28566 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.69■□□□□ 0.1
HTR1EP28566 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HTR1EP28566 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.69■□□□□ 0.1
HTR1EP28566 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTR1EP28566 AC073347.1-201ENST00000421633 2643 ntBASIC15.69■□□□□ 0.1
HTR1EP28566 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTR1EP28566 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTR1EP28566 DBET-201ENST00000630918 3363 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms