Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.35■□□□□ 0.05
CHMP24386 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.35■□□□□ 0.05
CHMP24386 GGT3P-204ENST00000453783 1664 ntBASIC15.35■□□□□ 0.05
CHMP24386 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.35■□□□□ 0.05
CHMP24386 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP24386 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.35■□□□□ 0.05
CHMP24386 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.34■□□□□ 0.05
CHMP24386 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
CHMP24386 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 TSPY26P-202ENST00000565928 3884 ntBASIC15.34■□□□□ 0.05
CHMP24386 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
CHMP24386 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.34■□□□□ 0.05
CHMP24386 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP24386 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP24386 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP24386 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP24386 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.34■□□□□ 0.05
CHMP24386 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP24386 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CHMP24386 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.34■□□□□ 0.05
CHMP24386 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CHMP24386 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP24386 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP24386 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.34■□□□□ 0.05
CHMP24386 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.34■□□□□ 0.05
CHMP24386 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP24386 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP24386 AC023141.13-201ENST00000604991 943 ntBASIC15.34■□□□□ 0.05
CHMP24386 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
CHMP24386 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.34■□□□□ 0.05
CHMP24386 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP24386 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHMP24386 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP24386 AL136379.1-201ENST00000623471 2642 ntBASIC15.34■□□□□ 0.05
CHMP24386 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.34■□□□□ 0.05
CHMP24386 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CHMP24386 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP24386 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHMP24386 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP24386 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.33■□□□□ 0.05
CHMP24386 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.33■□□□□ 0.05
CHMP24386 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP24386 AC010491.1-201ENST00000563101 2797 ntBASIC15.33■□□□□ 0.04
CHMP24386 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CHMP24386 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP24386 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP24386 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP24386 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.33■□□□□ 0.04
CHMP24386 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP24386 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP24386 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.33■□□□□ 0.04
CHMP24386 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP24386 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.33■□□□□ 0.04
CHMP24386 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.33■□□□□ 0.04
CHMP24386 REXO1L3P-201ENST00000622202 1288 ntBASIC15.33■□□□□ 0.04
CHMP24386 AC004877.2-201ENST00000623941 599 ntBASIC15.33■□□□□ 0.04
CHMP24386 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CHMP24386 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP24386 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP24386 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.33■□□□□ 0.04
CHMP24386 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP24386 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP24386 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms