Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 AL592424.1-201ENST00000563624 1536 ntBASIC13.94□□□□□ -0.18
BCL3P20749 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BCL3P20749 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
BCL3P20749 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.93□□□□□ -0.18
BCL3P20749 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
BCL3P20749 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.93□□□□□ -0.18
BCL3P20749 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.93□□□□□ -0.18
BCL3P20749 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
BCL3P20749 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 RHOQP3-201ENST00000437982 621 ntBASIC13.93□□□□□ -0.18
BCL3P20749 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.93□□□□□ -0.18
BCL3P20749 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.93□□□□□ -0.18
BCL3P20749 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.93□□□□□ -0.18
BCL3P20749 AC023141.13-201ENST00000604991 943 ntBASIC13.93□□□□□ -0.18
BCL3P20749 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.93□□□□□ -0.18
BCL3P20749 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.93□□□□□ -0.18
BCL3P20749 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
BCL3P20749 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.93□□□□□ -0.18
BCL3P20749 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.93□□□□□ -0.18
BCL3P20749 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
BCL3P20749 AL139384.1-201ENST00000612143 3047 ntBASIC13.93□□□□□ -0.18
BCL3P20749 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BCL3P20749 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.92□□□□□ -0.18
BCL3P20749 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
BCL3P20749 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.92□□□□□ -0.18
BCL3P20749 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.92□□□□□ -0.18
BCL3P20749 AC104109.2-201ENST00000602919 1418 ntBASIC13.92□□□□□ -0.18
BCL3P20749 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.92□□□□□ -0.18
BCL3P20749 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.92□□□□□ -0.18
BCL3P20749 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.92□□□□□ -0.18
BCL3P20749 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.92□□□□□ -0.18
BCL3P20749 AC079776.4-201ENST00000511039 504 ntBASIC13.92□□□□□ -0.18
BCL3P20749 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.92□□□□□ -0.18
BCL3P20749 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.92□□□□□ -0.18
BCL3P20749 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.92□□□□□ -0.18
BCL3P20749 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.92□□□□□ -0.18
BCL3P20749 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.92□□□□□ -0.18
BCL3P20749 AC007064.4-201ENST00000637740 555 ntBASIC13.92□□□□□ -0.18
BCL3P20749 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.92□□□□□ -0.18
BCL3P20749 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
BCL3P20749 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BCL3P20749 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
BCL3P20749 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BCL3P20749 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms