Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LMNB1P20700 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
LMNB1P20700 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LMNB1P20700 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LMNB1P20700 CYP4F24P-201ENST00000586049 1580 ntBASIC19.62■□□□□ 0.73
LMNB1P20700 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
LMNB1P20700 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LMNB1P20700 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 MIR326-201ENST00000362220 95 ntBASIC19.62■□□□□ 0.73
LMNB1P20700 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.62■□□□□ 0.73
LMNB1P20700 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.62■□□□□ 0.73
LMNB1P20700 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.62■□□□□ 0.73
LMNB1P20700 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.62■□□□□ 0.73
LMNB1P20700 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.62■□□□□ 0.73
LMNB1P20700 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.62■□□□□ 0.73
LMNB1P20700 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.62■□□□□ 0.73
LMNB1P20700 AC009486.1-201ENST00000569860 813 ntBASIC19.62■□□□□ 0.73
LMNB1P20700 AC124283.3-201ENST00000570869 594 ntBASIC19.62■□□□□ 0.73
LMNB1P20700 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.62■□□□□ 0.73
LMNB1P20700 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.62■□□□□ 0.73
LMNB1P20700 AC015967.2-201ENST00000624092 234 ntBASIC19.62■□□□□ 0.73
LMNB1P20700 AC006435.4-201ENST00000625037 234 ntBASIC19.62■□□□□ 0.73
LMNB1P20700 AL356737.1-201ENST00000634391 234 ntBASIC19.62■□□□□ 0.73
LMNB1P20700 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LMNB1P20700 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.62■□□□□ 0.73
LMNB1P20700 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LMNB1P20700 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.62■□□□□ 0.73
LMNB1P20700 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LMNB1P20700 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMNB1P20700 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
LMNB1P20700 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LMNB1P20700 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LMNB1P20700 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.61■□□□□ 0.73
LMNB1P20700 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 BAATP1-201ENST00000412284 1225 ntBASIC19.61■□□□□ 0.73
LMNB1P20700 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.61■□□□□ 0.73
LMNB1P20700 SOCS2P1-201ENST00000417727 557 ntBASIC19.61■□□□□ 0.73
LMNB1P20700 AC134915.1-201ENST00000426461 574 ntBASIC19.61■□□□□ 0.73
LMNB1P20700 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.61■□□□□ 0.73
LMNB1P20700 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.61■□□□□ 0.73
LMNB1P20700 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.61■□□□□ 0.73
LMNB1P20700 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.61■□□□□ 0.73
LMNB1P20700 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.61■□□□□ 0.73
LMNB1P20700 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 AC016629.1-201ENST00000596579 586 ntBASIC19.61■□□□□ 0.73
LMNB1P20700 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.61■□□□□ 0.73
LMNB1P20700 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.61■□□□□ 0.73
LMNB1P20700 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.61■□□□□ 0.73
LMNB1P20700 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMNB1P20700 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.61■□□□□ 0.73
LMNB1P20700 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.61■□□□□ 0.73
LMNB1P20700 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.6■□□□□ 0.73
LMNB1P20700 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.6■□□□□ 0.73
LMNB1P20700 HTR7P1-202ENST00000624664 4411 ntBASIC19.6■□□□□ 0.73
LMNB1P20700 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMNB1P20700 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMNB1P20700 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMNB1P20700 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.6■□□□□ 0.73
LMNB1P20700 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMNB1P20700 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.6■□□□□ 0.73
LMNB1P20700 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LMNB1P20700 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMNB1P20700 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LMNB1P20700 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMNB1P20700 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.6■□□□□ 0.73
LMNB1P20700 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.6■□□□□ 0.73
LMNB1P20700 KRT90P-201ENST00000549264 1064 ntBASIC19.6■□□□□ 0.73
LMNB1P20700 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.6■□□□□ 0.73
LMNB1P20700 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.6■□□□□ 0.73
LMNB1P20700 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.6■□□□□ 0.73
LMNB1P20700 AC244669.2-201ENST00000612320 853 ntBASIC19.6■□□□□ 0.73
LMNB1P20700 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.6■□□□□ 0.73
LMNB1P20700 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.6■□□□□ 0.73
LMNB1P20700 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMNB1P20700 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMNB1P20700 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms