Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RBP1P09455 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
RBP1P09455 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.14■□□□□ 0.17
RBP1P09455 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.14■□□□□ 0.17
RBP1P09455 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.14■□□□□ 0.17
RBP1P09455 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
RBP1P09455 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.14■□□□□ 0.17
RBP1P09455 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RBP1P09455 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
RBP1P09455 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
RBP1P09455 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RBP1P09455 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RBP1P09455 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RBP1P09455 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.13■□□□□ 0.17
RBP1P09455 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.13■□□□□ 0.17
RBP1P09455 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.13■□□□□ 0.17
RBP1P09455 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 AC092910.1-201ENST00000482027 1129 ntBASIC16.13■□□□□ 0.17
RBP1P09455 AC108751.1-201ENST00000490852 363 ntBASIC16.13■□□□□ 0.17
RBP1P09455 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 AC148477.8-201ENST00000624298 468 ntBASIC16.13■□□□□ 0.17
RBP1P09455 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.13■□□□□ 0.17
RBP1P09455 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RBP1P09455 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
RBP1P09455 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RBP1P09455 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.13■□□□□ 0.17
RBP1P09455 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.12■□□□□ 0.17
RBP1P09455 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.12■□□□□ 0.17
RBP1P09455 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.12■□□□□ 0.17
RBP1P09455 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 MST1L-201ENST00000442552 2185 ntBASIC16.12■□□□□ 0.17
RBP1P09455 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.12■□□□□ 0.17
RBP1P09455 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.12■□□□□ 0.17
RBP1P09455 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RBP1P09455 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.12■□□□□ 0.17
RBP1P09455 VN2R19P-201ENST00000442399 1052 ntBASIC16.12■□□□□ 0.17
RBP1P09455 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.12■□□□□ 0.17
RBP1P09455 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.12■□□□□ 0.17
RBP1P09455 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RBP1P09455 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.12■□□□□ 0.17
RBP1P09455 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
RBP1P09455 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RBP1P09455 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms