Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CTSBP07858 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CTSBP07858 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.41■□□□□ 0.06
CTSBP07858 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.41■□□□□ 0.06
CTSBP07858 AC002472.2-201ENST00000442739 958 ntBASIC15.41■□□□□ 0.06
CTSBP07858 AL512638.1-201ENST00000457493 794 ntBASIC15.41■□□□□ 0.06
CTSBP07858 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.41■□□□□ 0.06
CTSBP07858 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.41■□□□□ 0.06
CTSBP07858 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CTSBP07858 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.41■□□□□ 0.06
CTSBP07858 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.41■□□□□ 0.06
CTSBP07858 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CTSBP07858 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CTSBP07858 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.4■□□□□ 0.06
CTSBP07858 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
CTSBP07858 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.4■□□□□ 0.06
CTSBP07858 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.4■□□□□ 0.06
CTSBP07858 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CTSBP07858 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.4■□□□□ 0.06
CTSBP07858 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.4■□□□□ 0.06
CTSBP07858 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.4■□□□□ 0.06
CTSBP07858 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.4■□□□□ 0.06
CTSBP07858 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.4■□□□□ 0.06
CTSBP07858 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.4■□□□□ 0.06
CTSBP07858 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.4■□□□□ 0.06
CTSBP07858 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 AL512361.1-201ENST00000554200 418 ntBASIC15.4■□□□□ 0.06
CTSBP07858 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 OR6D1P-202ENST00000641007 5290 ntBASIC15.4■□□□□ 0.06
CTSBP07858 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CTSBP07858 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.4■□□□□ 0.06
CTSBP07858 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.4■□□□□ 0.06
CTSBP07858 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.4■□□□□ 0.06
CTSBP07858 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CTSBP07858 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CTSBP07858 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CTSBP07858 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTSBP07858 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
CTSBP07858 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTSBP07858 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTSBP07858 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSBP07858 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSBP07858 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSBP07858 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.39■□□□□ 0.05
CTSBP07858 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSBP07858 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CTSBP07858 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSBP07858 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms