Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
CAPN1P07384 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN1P07384 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.16■□□□□ 0.18
CAPN1P07384 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPN1P07384 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.16■□□□□ 0.18
CAPN1P07384 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPN1P07384 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CAPN1P07384 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN1P07384 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.16■□□□□ 0.18
CAPN1P07384 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN1P07384 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CAPN1P07384 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CAPN1P07384 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.15■□□□□ 0.18
CAPN1P07384 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CAPN1P07384 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.15■□□□□ 0.18
CAPN1P07384 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CAPN1P07384 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.15■□□□□ 0.18
CAPN1P07384 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CAPN1P07384 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.15■□□□□ 0.18
CAPN1P07384 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.15■□□□□ 0.18
CAPN1P07384 ACTL9-202ENST00000612068 1252 ntBASIC16.15■□□□□ 0.18
CAPN1P07384 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CAPN1P07384 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 ELL2P1-201ENST00000413990 1906 ntBASIC16.15■□□□□ 0.18
CAPN1P07384 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN1P07384 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN1P07384 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CAPN1P07384 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CAPN1P07384 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN1P07384 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
CAPN1P07384 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.14■□□□□ 0.17
CAPN1P07384 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN1P07384 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.14■□□□□ 0.17
CAPN1P07384 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CAPN1P07384 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CAPN1P07384 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN1P07384 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.14■□□□□ 0.17
CAPN1P07384 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN1P07384 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CAPN1P07384 AC074386.1-202ENST00000463561 864 ntBASIC16.14■□□□□ 0.17
CAPN1P07384 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.14■□□□□ 0.17
CAPN1P07384 AL031432.2-201ENST00000566714 459 ntBASIC16.14■□□□□ 0.17
CAPN1P07384 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN1P07384 AL928711.1-201ENST00000570165 459 ntBASIC16.14■□□□□ 0.17
CAPN1P07384 AC023141.13-201ENST00000604991 943 ntBASIC16.14■□□□□ 0.17
CAPN1P07384 AL596442.2-201ENST00000610240 980 ntBASIC16.14■□□□□ 0.17
CAPN1P07384 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.14■□□□□ 0.17
CAPN1P07384 AC007064.4-201ENST00000637740 555 ntBASIC16.14■□□□□ 0.17
CAPN1P07384 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.14■□□□□ 0.17
CAPN1P07384 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CAPN1P07384 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN1P07384 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN1P07384 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms