Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHGBP05060 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CHGBP05060 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CHGBP05060 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.55■□□□□ 0.72
CHGBP05060 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.55■□□□□ 0.72
CHGBP05060 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.55■□□□□ 0.72
CHGBP05060 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.55■□□□□ 0.72
CHGBP05060 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.55■□□□□ 0.72
CHGBP05060 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.55■□□□□ 0.72
CHGBP05060 MIR943-201ENST00000401286 94 ntBASIC19.55■□□□□ 0.72
CHGBP05060 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.55■□□□□ 0.72
CHGBP05060 CNN2P2-201ENST00000443536 909 ntBASIC19.55■□□□□ 0.72
CHGBP05060 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.55■□□□□ 0.72
CHGBP05060 FAM86GP-201ENST00000448322 971 ntBASIC19.55■□□□□ 0.72
CHGBP05060 CNN2P3-201ENST00000450201 906 ntBASIC19.55■□□□□ 0.72
CHGBP05060 AC097493.3-201ENST00000509725 367 ntBASIC19.55■□□□□ 0.72
CHGBP05060 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.55■□□□□ 0.72
CHGBP05060 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CHGBP05060 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.55■□□□□ 0.72
CHGBP05060 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.55■□□□□ 0.72
CHGBP05060 AC007967.4-201ENST00000614700 386 ntBASIC19.55■□□□□ 0.72
CHGBP05060 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 AL136317.3-201ENST00000618497 906 ntBASIC19.55■□□□□ 0.72
CHGBP05060 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CHGBP05060 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CHGBP05060 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CHGBP05060 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.55■□□□□ 0.72
CHGBP05060 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 DOC2GP-204ENST00000639052 2548 ntBASIC19.55■□□□□ 0.72
CHGBP05060 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHGBP05060 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHGBP05060 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHGBP05060 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.54■□□□□ 0.72
CHGBP05060 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHGBP05060 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHGBP05060 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHGBP05060 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.54■□□□□ 0.72
CHGBP05060 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHGBP05060 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHGBP05060 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHGBP05060 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.54■□□□□ 0.72
CHGBP05060 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.54■□□□□ 0.72
CHGBP05060 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CHGBP05060 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.54■□□□□ 0.72
CHGBP05060 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.54■□□□□ 0.72
CHGBP05060 MIR4321-201ENST00000592276 80 ntBASIC19.54■□□□□ 0.72
CHGBP05060 RN7SL828P-201ENST00000607615 303 ntBASIC19.54■□□□□ 0.72
CHGBP05060 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHGBP05060 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHGBP05060 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.54■□□□□ 0.72
CHGBP05060 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.54■□□□□ 0.72
CHGBP05060 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CHGBP05060 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.54■□□□□ 0.72
CHGBP05060 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHGBP05060 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CHGBP05060 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHGBP05060 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CHGBP05060 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.53■□□□□ 0.72
CHGBP05060 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 AL391005.1-201ENST00000623953 2435 ntBASIC19.53■□□□□ 0.72
CHGBP05060 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHGBP05060 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CHGBP05060 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHGBP05060 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.53■□□□□ 0.72
CHGBP05060 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.53■□□□□ 0.72
CHGBP05060 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.53■□□□□ 0.72
CHGBP05060 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHGBP05060 AL138828.2-201ENST00000615812 383 ntBASIC19.53■□□□□ 0.72
CHGBP05060 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHGBP05060 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHGBP05060 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CHGBP05060 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHGBP05060 AP003680.1-201ENST00000598970 3660 ntBASIC19.53■□□□□ 0.72
CHGBP05060 AC024909.3-201ENST00000611513 2257 ntBASIC19.53■□□□□ 0.72
CHGBP05060 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHGBP05060 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms