Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
APOC1P02654 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.54□□□□□ -0.08
APOC1P02654 AC012569.1-201ENST00000591191 1524 ntBASIC14.54□□□□□ -0.08
APOC1P02654 SLC22A20-204ENST00000530038 1673 ntBASIC14.54□□□□□ -0.08
APOC1P02654 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 GPAA1P2-202ENST00000606848 1787 ntBASIC14.54□□□□□ -0.08
APOC1P02654 ALOX12P2-203ENST00000570921 1945 ntBASIC14.54□□□□□ -0.08
APOC1P02654 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 AL031731.1-201ENST00000642131 2094 ntBASIC14.54□□□□□ -0.08
APOC1P02654 AL671710.1-201ENST00000610245 2349 ntBASIC14.54□□□□□ -0.08
APOC1P02654 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.54□□□□□ -0.08
APOC1P02654 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.54□□□□□ -0.08
APOC1P02654 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
APOC1P02654 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 PCGF3-213ENST00000620529 1899 ntBASIC14.53□□□□□ -0.08
APOC1P02654 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
APOC1P02654 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.53□□□□□ -0.08
APOC1P02654 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.53□□□□□ -0.08
APOC1P02654 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.53□□□□□ -0.08
APOC1P02654 EMBP1-201ENST00000458200 901 ntBASIC14.53□□□□□ -0.08
APOC1P02654 AC093909.1-201ENST00000504731 1122 ntBASIC14.53□□□□□ -0.08
APOC1P02654 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.53□□□□□ -0.08
APOC1P02654 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.53□□□□□ -0.08
APOC1P02654 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 AC010654.1-201ENST00000615722 808 ntBASIC14.53□□□□□ -0.08
APOC1P02654 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.53□□□□□ -0.08
APOC1P02654 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.53□□□□□ -0.08
APOC1P02654 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
APOC1P02654 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.53□□□□□ -0.08
APOC1P02654 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
APOC1P02654 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
APOC1P02654 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
APOC1P02654 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
APOC1P02654 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.52□□□□□ -0.08
APOC1P02654 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
APOC1P02654 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC1P02654 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.52□□□□□ -0.08
APOC1P02654 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC1P02654 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC1P02654 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC1P02654 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.52□□□□□ -0.08
APOC1P02654 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
APOC1P02654 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC1P02654 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.52□□□□□ -0.08
APOC1P02654 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
APOC1P02654 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.52□□□□□ -0.08
APOC1P02654 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.52□□□□□ -0.09
APOC1P02654 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.52□□□□□ -0.09
APOC1P02654 PRSS29P-201ENST00000440800 595 ntBASIC14.52□□□□□ -0.09
APOC1P02654 DUSP5P1-201ENST00000441325 1139 ntBASIC14.52□□□□□ -0.09
APOC1P02654 UNC93B7-201ENST00000509439 705 ntBASIC14.52□□□□□ -0.09
APOC1P02654 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.52□□□□□ -0.09
APOC1P02654 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.52□□□□□ -0.09
APOC1P02654 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.52□□□□□ -0.09
APOC1P02654 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.52□□□□□ -0.09
APOC1P02654 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.52□□□□□ -0.09
APOC1P02654 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.52□□□□□ -0.09
APOC1P02654 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
APOC1P02654 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.52□□□□□ -0.09
APOC1P02654 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.52□□□□□ -0.09
APOC1P02654 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
APOC1P02654 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.52□□□□□ -0.09
APOC1P02654 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.52□□□□□ -0.09
APOC1P02654 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOC1P02654 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.52□□□□□ -0.09
APOC1P02654 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
APOC1P02654 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
APOC1P02654 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms