Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MBD3O95983 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD3O95983 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
MBD3O95983 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD3O95983 AP003680.1-201ENST00000598970 3660 ntBASIC18.78■□□□□ 0.6
MBD3O95983 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD3O95983 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD3O95983 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD3O95983 U82695.1-201ENST00000635752 1889 ntBASIC18.78■□□□□ 0.6
MBD3O95983 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD3O95983 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MBD3O95983 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD3O95983 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 BX005266.1-201ENST00000473402 457 ntBASIC18.78■□□□□ 0.6
MBD3O95983 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD3O95983 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.78■□□□□ 0.6
MBD3O95983 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
MBD3O95983 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD3O95983 AL589182.2-201ENST00000619332 1049 ntBASIC18.78■□□□□ 0.6
MBD3O95983 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD3O95983 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3O95983 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD3O95983 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.77■□□□□ 0.6
MBD3O95983 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
MBD3O95983 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 ARMC10P1-201ENST00000313754 855 ntBASIC18.77■□□□□ 0.6
MBD3O95983 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MBD3O95983 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MBD3O95983 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.77■□□□□ 0.6
MBD3O95983 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.77■□□□□ 0.6
MBD3O95983 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
MBD3O95983 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3O95983 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.77■□□□□ 0.6
MBD3O95983 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
MBD3O95983 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
MBD3O95983 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.77■□□□□ 0.59
MBD3O95983 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.76■□□□□ 0.59
MBD3O95983 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD3O95983 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
MBD3O95983 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.76■□□□□ 0.59
MBD3O95983 HCG4-201ENST00000418983 998 ntBASIC18.76■□□□□ 0.59
MBD3O95983 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD3O95983 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.76■□□□□ 0.59
MBD3O95983 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD3O95983 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MBD3O95983 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MBD3O95983 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3O95983 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms