Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.12■□□□□ 0.33
TRUB2O95900 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.12■□□□□ 0.33
TRUB2O95900 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.12■□□□□ 0.33
TRUB2O95900 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.12■□□□□ 0.33
TRUB2O95900 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.12■□□□□ 0.33
TRUB2O95900 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.12■□□□□ 0.33
TRUB2O95900 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.12■□□□□ 0.33
TRUB2O95900 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.12■□□□□ 0.33
TRUB2O95900 AC027612.4-201ENST00000605371 583 ntBASIC17.12■□□□□ 0.33
TRUB2O95900 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.12■□□□□ 0.33
TRUB2O95900 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.12■□□□□ 0.33
TRUB2O95900 AC084121.4-201ENST00000641598 221 ntBASIC17.12■□□□□ 0.33
TRUB2O95900 AF228730.8-201ENST00000642140 221 ntBASIC17.12■□□□□ 0.33
TRUB2O95900 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.12■□□□□ 0.33
TRUB2O95900 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.12■□□□□ 0.33
TRUB2O95900 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRUB2O95900 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TRUB2O95900 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.12■□□□□ 0.33
TRUB2O95900 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.12■□□□□ 0.33
TRUB2O95900 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRUB2O95900 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRUB2O95900 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRUB2O95900 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRUB2O95900 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRUB2O95900 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.11■□□□□ 0.33
TRUB2O95900 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.11■□□□□ 0.33
TRUB2O95900 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.11■□□□□ 0.33
TRUB2O95900 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.11■□□□□ 0.33
TRUB2O95900 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.11■□□□□ 0.33
TRUB2O95900 AC142381.1-201ENST00000426099 345 ntBASIC17.11■□□□□ 0.33
TRUB2O95900 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 AC023141.5-201ENST00000458585 616 ntBASIC17.11■□□□□ 0.33
TRUB2O95900 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.11■□□□□ 0.33
TRUB2O95900 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.11■□□□□ 0.33
TRUB2O95900 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.11■□□□□ 0.33
TRUB2O95900 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRUB2O95900 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.11■□□□□ 0.33
TRUB2O95900 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.11■□□□□ 0.33
TRUB2O95900 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRUB2O95900 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRUB2O95900 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.11■□□□□ 0.33
TRUB2O95900 AL603832.2-201ENST00000566195 2125 ntBASIC17.11■□□□□ 0.33
TRUB2O95900 FOXO1B-201ENST00000504678 1527 ntBASIC17.11■□□□□ 0.33
TRUB2O95900 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.11■□□□□ 0.33
TRUB2O95900 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.11■□□□□ 0.33
TRUB2O95900 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 AC024909.3-201ENST00000611513 2257 ntBASIC17.1■□□□□ 0.33
TRUB2O95900 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRUB2O95900 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.1■□□□□ 0.33
TRUB2O95900 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRUB2O95900 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TRUB2O95900 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRUB2O95900 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.1■□□□□ 0.33
TRUB2O95900 KRT18P32-201ENST00000424695 1287 ntBASIC17.1■□□□□ 0.33
TRUB2O95900 FAM58DP-201ENST00000428076 619 ntBASIC17.1■□□□□ 0.33
TRUB2O95900 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.1■□□□□ 0.33
TRUB2O95900 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.1■□□□□ 0.33
TRUB2O95900 SLC25A39P2-201ENST00000537614 270 ntBASIC17.1■□□□□ 0.33
TRUB2O95900 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRUB2O95900 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.1■□□□□ 0.33
TRUB2O95900 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.1■□□□□ 0.33
TRUB2O95900 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.1■□□□□ 0.33
TRUB2O95900 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.1■□□□□ 0.33
TRUB2O95900 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRUB2O95900 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.1■□□□□ 0.33
TRUB2O95900 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
TRUB2O95900 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms