Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SEC22BO75396 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.81■□□□□ 0.12
SEC22BO75396 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
SEC22BO75396 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.81■□□□□ 0.12
SEC22BO75396 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 PRSS29P-201ENST00000440800 595 ntBASIC15.81■□□□□ 0.12
SEC22BO75396 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.81■□□□□ 0.12
SEC22BO75396 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.81■□□□□ 0.12
SEC22BO75396 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.81■□□□□ 0.12
SEC22BO75396 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.81■□□□□ 0.12
SEC22BO75396 AC021097.1-201ENST00000607902 574 ntBASIC15.81■□□□□ 0.12
SEC22BO75396 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 AL691432.3-201ENST00000621860 400 ntBASIC15.81■□□□□ 0.12
SEC22BO75396 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SEC22BO75396 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC22BO75396 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.81■□□□□ 0.12
SEC22BO75396 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SEC22BO75396 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.8■□□□□ 0.12
SEC22BO75396 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SEC22BO75396 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.8■□□□□ 0.12
SEC22BO75396 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.8■□□□□ 0.12
SEC22BO75396 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC22BO75396 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.8■□□□□ 0.12
SEC22BO75396 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC22BO75396 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 AC004870.1-201ENST00000315132 882 ntBASIC15.8■□□□□ 0.12
SEC22BO75396 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
SEC22BO75396 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.8■□□□□ 0.12
SEC22BO75396 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC22BO75396 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.8■□□□□ 0.12
SEC22BO75396 RNU1-129P-201ENST00000384064 167 ntBASIC15.8■□□□□ 0.12
SEC22BO75396 HMGA1P7-201ENST00000406908 502 ntBASIC15.8■□□□□ 0.12
SEC22BO75396 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.8■□□□□ 0.12
SEC22BO75396 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.8■□□□□ 0.12
SEC22BO75396 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.8■□□□□ 0.12
SEC22BO75396 AC108751.1-201ENST00000490852 363 ntBASIC15.8■□□□□ 0.12
SEC22BO75396 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SEC22BO75396 AL160237.2-201ENST00000556165 472 ntBASIC15.8■□□□□ 0.12
SEC22BO75396 U1.21-201ENST00000580816 167 ntBASIC15.8■□□□□ 0.12
SEC22BO75396 RN7SL510P-201ENST00000581311 263 ntBASIC15.8■□□□□ 0.12
SEC22BO75396 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.8■□□□□ 0.12
SEC22BO75396 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.8■□□□□ 0.12
SEC22BO75396 AL773604.1-201ENST00000617417 272 ntBASIC15.8■□□□□ 0.12
SEC22BO75396 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC22BO75396 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SEC22BO75396 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.8■□□□□ 0.12
SEC22BO75396 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SEC22BO75396 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC22BO75396 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC22BO75396 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC22BO75396 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms