Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ZNF253O75346 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
ZNF253O75346 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 AC004817.3-201ENST00000602957 2129 ntBASIC12.82□□□□□ -0.36
ZNF253O75346 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.82□□□□□ -0.36
ZNF253O75346 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZNF253O75346 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZNF253O75346 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 RCN1P1-201ENST00000400413 996 ntBASIC12.82□□□□□ -0.36
ZNF253O75346 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
ZNF253O75346 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.82□□□□□ -0.36
ZNF253O75346 TMPOP1-202ENST00000424642 1267 ntBASIC12.82□□□□□ -0.36
ZNF253O75346 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.82□□□□□ -0.36
ZNF253O75346 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF253O75346 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.82□□□□□ -0.36
ZNF253O75346 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF253O75346 AL353135.1-201ENST00000606729 504 ntBASIC12.82□□□□□ -0.36
ZNF253O75346 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF253O75346 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF253O75346 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.82□□□□□ -0.36
ZNF253O75346 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 AC022532.1-201ENST00000624563 1728 ntBASIC12.82□□□□□ -0.36
ZNF253O75346 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF253O75346 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 AC243591.1-201ENST00000452967 1364 ntBASIC12.81□□□□□ -0.36
ZNF253O75346 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF253O75346 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 FAM86EP-206ENST00000510506 987 ntBASIC12.81□□□□□ -0.36
ZNF253O75346 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.81□□□□□ -0.36
ZNF253O75346 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF253O75346 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ZNF253O75346 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF253O75346 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ZNF253O75346 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
ZNF253O75346 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 AL590787.1-201ENST00000568856 1315 ntBASIC12.81□□□□□ -0.36
ZNF253O75346 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF253O75346 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF253O75346 TOP3BP1-201ENST00000420768 1380 ntBASIC12.81□□□□□ -0.36
ZNF253O75346 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF253O75346 AC138035.3-201ENST00000622706 2791 ntBASIC12.81□□□□□ -0.36
ZNF253O75346 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.8□□□□□ -0.36
ZNF253O75346 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms