Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CTNND1O60716 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CTNND1O60716 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.98■□□□□ 0.63
CTNND1O60716 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CTNND1O60716 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CTNND1O60716 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CTNND1O60716 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.98■□□□□ 0.63
CTNND1O60716 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CTNND1O60716 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CTNND1O60716 HIST3H2BA-201ENST00000436555 524 ntBASIC18.98■□□□□ 0.63
CTNND1O60716 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.98■□□□□ 0.63
CTNND1O60716 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.98■□□□□ 0.63
CTNND1O60716 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.98■□□□□ 0.63
CTNND1O60716 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.98■□□□□ 0.63
CTNND1O60716 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CTNND1O60716 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.98■□□□□ 0.63
CTNND1O60716 AC025048.3-201ENST00000590609 569 ntBASIC18.98■□□□□ 0.63
CTNND1O60716 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.98■□□□□ 0.63
CTNND1O60716 AC005702.4-201ENST00000618393 416 ntBASIC18.98■□□□□ 0.63
CTNND1O60716 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CTNND1O60716 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CTNND1O60716 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.98■□□□□ 0.63
CTNND1O60716 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 CYP4F24P-201ENST00000586049 1580 ntBASIC18.98■□□□□ 0.63
CTNND1O60716 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.97■□□□□ 0.63
CTNND1O60716 AL136982.4-201ENST00000437689 1740 ntBASIC18.97■□□□□ 0.63
CTNND1O60716 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.97■□□□□ 0.63
CTNND1O60716 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNND1O60716 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CTNND1O60716 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNND1O60716 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNND1O60716 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNND1O60716 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNND1O60716 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.97■□□□□ 0.63
CTNND1O60716 AC098850.1-201ENST00000419919 790 ntBASIC18.97■□□□□ 0.63
CTNND1O60716 AC112492.5-201ENST00000421897 457 ntBASIC18.97■□□□□ 0.63
CTNND1O60716 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.97■□□□□ 0.63
CTNND1O60716 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.97■□□□□ 0.63
CTNND1O60716 KRT17P8-201ENST00000540749 863 ntBASIC18.97■□□□□ 0.63
CTNND1O60716 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.97■□□□□ 0.63
CTNND1O60716 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.97■□□□□ 0.63
CTNND1O60716 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.97■□□□□ 0.63
CTNND1O60716 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.97■□□□□ 0.63
CTNND1O60716 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNND1O60716 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.97■□□□□ 0.63
CTNND1O60716 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.97■□□□□ 0.63
CTNND1O60716 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.97■□□□□ 0.63
CTNND1O60716 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTNND1O60716 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.97■□□□□ 0.63
CTNND1O60716 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.97■□□□□ 0.63
CTNND1O60716 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CTNND1O60716 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTNND1O60716 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CTNND1O60716 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.96■□□□□ 0.63
CTNND1O60716 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CTNND1O60716 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.96■□□□□ 0.63
CTNND1O60716 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.96■□□□□ 0.63
CTNND1O60716 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
CTNND1O60716 TIMM17BP1-201ENST00000545713 516 ntBASIC18.96■□□□□ 0.63
CTNND1O60716 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
CTNND1O60716 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.96■□□□□ 0.63
CTNND1O60716 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.96■□□□□ 0.63
CTNND1O60716 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.96■□□□□ 0.63
CTNND1O60716 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.96■□□□□ 0.63
CTNND1O60716 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.96■□□□□ 0.63
CTNND1O60716 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.96■□□□□ 0.63
CTNND1O60716 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CTNND1O60716 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.96■□□□□ 0.63
CTNND1O60716 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.96■□□□□ 0.63
CTNND1O60716 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.96■□□□□ 0.63
CTNND1O60716 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTNND1O60716 GGT3P-204ENST00000453783 1664 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms