Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.24■□□□□ 0.83
SRGAP3O43295 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.24■□□□□ 0.83
SRGAP3O43295 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.24■□□□□ 0.83
SRGAP3O43295 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.23■□□□□ 0.83
SRGAP3O43295 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.23■□□□□ 0.83
SRGAP3O43295 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SRGAP3O43295 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SRGAP3O43295 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SRGAP3O43295 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.23■□□□□ 0.83
SRGAP3O43295 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.23■□□□□ 0.83
SRGAP3O43295 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.23■□□□□ 0.83
SRGAP3O43295 FAM86GP-201ENST00000448322 971 ntBASIC20.23■□□□□ 0.83
SRGAP3O43295 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.23■□□□□ 0.83
SRGAP3O43295 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.23■□□□□ 0.83
SRGAP3O43295 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.23■□□□□ 0.83
SRGAP3O43295 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.23■□□□□ 0.83
SRGAP3O43295 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.23■□□□□ 0.83
SRGAP3O43295 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.23■□□□□ 0.83
SRGAP3O43295 AC051619.7-201ENST00000568314 623 ntBASIC20.23■□□□□ 0.83
SRGAP3O43295 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SRGAP3O43295 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.23■□□□□ 0.83
SRGAP3O43295 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRGAP3O43295 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
SRGAP3O43295 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SRGAP3O43295 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.22■□□□□ 0.83
SRGAP3O43295 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SRGAP3O43295 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SRGAP3O43295 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SRGAP3O43295 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.22■□□□□ 0.83
SRGAP3O43295 AL353705.2-201ENST00000428243 662 ntBASIC20.22■□□□□ 0.83
SRGAP3O43295 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.22■□□□□ 0.83
SRGAP3O43295 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.22■□□□□ 0.83
SRGAP3O43295 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.22■□□□□ 0.83
SRGAP3O43295 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.22■□□□□ 0.83
SRGAP3O43295 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 BANF1P1-201ENST00000553684 263 ntBASIC20.22■□□□□ 0.83
SRGAP3O43295 AC027796.2-201ENST00000575326 344 ntBASIC20.22■□□□□ 0.83
SRGAP3O43295 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.22■□□□□ 0.83
SRGAP3O43295 AC007967.4-201ENST00000614700 386 ntBASIC20.22■□□□□ 0.83
SRGAP3O43295 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.22■□□□□ 0.83
SRGAP3O43295 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.22■□□□□ 0.83
SRGAP3O43295 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.22■□□□□ 0.83
SRGAP3O43295 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRGAP3O43295 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.22■□□□□ 0.83
SRGAP3O43295 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SRGAP3O43295 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 AL596087.1-201ENST00000400979 1969 ntBASIC20.21■□□□□ 0.83
SRGAP3O43295 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SRGAP3O43295 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.21■□□□□ 0.83
SRGAP3O43295 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.21■□□□□ 0.83
SRGAP3O43295 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.21■□□□□ 0.83
SRGAP3O43295 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.21■□□□□ 0.83
SRGAP3O43295 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.21■□□□□ 0.83
SRGAP3O43295 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.21■□□□□ 0.83
SRGAP3O43295 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.21■□□□□ 0.83
SRGAP3O43295 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SRGAP3O43295 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.21■□□□□ 0.83
SRGAP3O43295 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRGAP3O43295 MTHFR-217ENST00000641820 1569 ntBASIC20.21■□□□□ 0.83
SRGAP3O43295 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.2■□□□□ 0.82
SRGAP3O43295 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms