Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC243562.2-201ENST00000561247 970 ntBASIC25.77■■□□□ 1.72
CHD1O14646 RN7SL774P-201ENST00000577467 290 ntBASIC25.77■■□□□ 1.72
CHD1O14646 AC007663.3-201ENST00000609632 465 ntBASIC25.77■■□□□ 1.72
CHD1O14646 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC25.77■■□□□ 1.72
CHD1O14646 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1O14646 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1O14646 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC25.77■■□□□ 1.72
CHD1O14646 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1O14646 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1O14646 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1O14646 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
CHD1O14646 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1O14646 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1O14646 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
CHD1O14646 AC136604.1-201ENST00000418535 575 ntBASIC25.77■■□□□ 1.72
CHD1O14646 RNA5SP486-201ENST00000515961 83 ntBASIC25.77■■□□□ 1.72
CHD1O14646 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC25.77■■□□□ 1.72
CHD1O14646 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC25.76■■□□□ 1.72
CHD1O14646 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC25.76■■□□□ 1.71
CHD1O14646 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD1O14646 KRT8P35-201ENST00000483942 1338 ntBASIC25.76■■□□□ 1.71
CHD1O14646 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
CHD1O14646 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC25.76■■□□□ 1.71
CHD1O14646 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD1O14646 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC25.76■■□□□ 1.71
CHD1O14646 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD1O14646 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
CHD1O14646 MIR3147-201ENST00000577811 66 ntBASIC25.76■■□□□ 1.71
CHD1O14646 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC25.76■■□□□ 1.71
CHD1O14646 AL353726.2-201ENST00000623259 884 ntBASIC25.76■■□□□ 1.71
CHD1O14646 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC25.76■■□□□ 1.71
CHD1O14646 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHD1O14646 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD1O14646 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD1O14646 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC25.76■■□□□ 1.71
CHD1O14646 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC25.75■■□□□ 1.71
CHD1O14646 TUBBP5-203ENST00000508529 1334 ntBASIC25.75■■□□□ 1.71
CHD1O14646 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC25.75■■□□□ 1.71
CHD1O14646 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1O14646 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
CHD1O14646 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC25.75■■□□□ 1.71
CHD1O14646 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
CHD1O14646 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1O14646 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1O14646 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1O14646 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1O14646 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1O14646 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC25.75■■□□□ 1.71
CHD1O14646 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC25.75■■□□□ 1.71
CHD1O14646 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1O14646 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1O14646 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC25.75■■□□□ 1.71
CHD1O14646 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1O14646 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1O14646 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC25.75■■□□□ 1.71
CHD1O14646 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 CRCP-204ENST00000398684 492 ntTSL 2 BASIC25.74■■□□□ 1.71
CHD1O14646 MPV17-205ENST00000402310 906 ntTSL 5 BASIC25.74■■□□□ 1.71
CHD1O14646 PFN2-202ENST00000423691 911 ntTSL 2 BASIC25.74■■□□□ 1.71
CHD1O14646 AL354877.1-201ENST00000424412 413 ntBASIC25.74■■□□□ 1.71
CHD1O14646 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
CHD1O14646 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC25.74■■□□□ 1.71
CHD1O14646 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC25.74■■□□□ 1.71
CHD1O14646 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 TNXA-203ENST00000507684 2038 ntBASIC25.74■■□□□ 1.71
CHD1O14646 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC25.74■■□□□ 1.71
CHD1O14646 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 NDUFAB1P1-201ENST00000404262 460 ntBASIC25.74■■□□□ 1.71
CHD1O14646 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC25.74■■□□□ 1.71
CHD1O14646 CEP164P1-201ENST00000455142 418 ntBASIC25.74■■□□□ 1.71
CHD1O14646 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC25.74■■□□□ 1.71
CHD1O14646 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC25.74■■□□□ 1.71
CHD1O14646 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC25.74■■□□□ 1.71
CHD1O14646 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC25.74■■□□□ 1.71
CHD1O14646 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1O14646 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC25.73■■□□□ 1.71
CHD1O14646 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms