Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.16■□□□□ 0.34
SOX1O00570 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SOX1O00570 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.16■□□□□ 0.34
SOX1O00570 AC005357.2-202ENST00000590507 1060 ntBASIC17.16■□□□□ 0.34
SOX1O00570 AL136301.1-201ENST00000615830 422 ntBASIC17.16■□□□□ 0.34
SOX1O00570 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SOX1O00570 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.16■□□□□ 0.34
SOX1O00570 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.16■□□□□ 0.34
SOX1O00570 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.16■□□□□ 0.34
SOX1O00570 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SOX1O00570 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SOX1O00570 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.16■□□□□ 0.34
SOX1O00570 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SOX1O00570 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SOX1O00570 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.16■□□□□ 0.34
SOX1O00570 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.15■□□□□ 0.34
SOX1O00570 AC108860.2-201ENST00000562760 2183 ntBASIC17.15■□□□□ 0.34
SOX1O00570 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.15■□□□□ 0.34
SOX1O00570 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.15■□□□□ 0.34
SOX1O00570 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.15■□□□□ 0.34
SOX1O00570 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SOX1O00570 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.15■□□□□ 0.34
SOX1O00570 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.15■□□□□ 0.34
SOX1O00570 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.15■□□□□ 0.34
SOX1O00570 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.15■□□□□ 0.34
SOX1O00570 RN7SL11P-201ENST00000471305 293 ntBASIC17.15■□□□□ 0.34
SOX1O00570 AC125604.1-201ENST00000496255 707 ntBASIC17.15■□□□□ 0.34
SOX1O00570 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.15■□□□□ 0.34
SOX1O00570 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.15■□□□□ 0.34
SOX1O00570 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.15■□□□□ 0.34
SOX1O00570 AC135983.4-201ENST00000564116 1262 ntBASIC17.15■□□□□ 0.34
SOX1O00570 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.15■□□□□ 0.34
SOX1O00570 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.15■□□□□ 0.34
SOX1O00570 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SOX1O00570 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.15■□□□□ 0.34
SOX1O00570 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
SOX1O00570 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 AC004408.2-201ENST00000623613 2777 ntBASIC17.15■□□□□ 0.34
SOX1O00570 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SOX1O00570 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
SOX1O00570 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.15■□□□□ 0.34
SOX1O00570 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SOX1O00570 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX1O00570 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SOX1O00570 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SOX1O00570 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX1O00570 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.14■□□□□ 0.33
SOX1O00570 AL136982.4-201ENST00000437689 1740 ntBASIC17.14■□□□□ 0.33
SOX1O00570 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX1O00570 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX1O00570 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX1O00570 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SOX1O00570 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.14■□□□□ 0.33
SOX1O00570 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.14■□□□□ 0.33
SOX1O00570 MIR1202-201ENST00000408529 83 ntBASIC17.14■□□□□ 0.33
SOX1O00570 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.14■□□□□ 0.33
SOX1O00570 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.14■□□□□ 0.33
SOX1O00570 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.14■□□□□ 0.33
SOX1O00570 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.14■□□□□ 0.33
SOX1O00570 POM121L10P-201ENST00000436994 1285 ntBASIC17.14■□□□□ 0.33
SOX1O00570 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SOX1O00570 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.14■□□□□ 0.33
SOX1O00570 AC044849.1-201ENST00000519737 1188 ntBASIC17.14■□□□□ 0.33
SOX1O00570 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.14■□□□□ 0.33
SOX1O00570 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SOX1O00570 AC141586.1-203ENST00000567242 366 ntBASIC17.14■□□□□ 0.33
SOX1O00570 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.14■□□□□ 0.33
SOX1O00570 AC138649.2-201ENST00000615886 705 ntBASIC17.14■□□□□ 0.33
SOX1O00570 AC009084.3-201ENST00000623356 437 ntBASIC17.14■□□□□ 0.33
SOX1O00570 FRMD8P1-201ENST00000440433 1524 ntBASIC17.14■□□□□ 0.33
SOX1O00570 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.14■□□□□ 0.33
SOX1O00570 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX1O00570 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX1O00570 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SOX1O00570 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.13■□□□□ 0.33
SOX1O00570 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SOX1O00570 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms