Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 SDHAP3-202ENST00000515467 728 ntBASIC18.86■□□□□ 0.61
USP17L11C9JVI0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 CHCHD2P3-201ENST00000603038 451 ntBASIC18.86■□□□□ 0.61
USP17L11C9JVI0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 AC004790.1-201ENST00000612686 536 ntBASIC18.86■□□□□ 0.61
USP17L11C9JVI0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.86■□□□□ 0.61
USP17L11C9JVI0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 GGT3P-204ENST00000453783 1664 ntBASIC18.85■□□□□ 0.61
USP17L11C9JVI0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 AL139010.1-201ENST00000454878 894 ntBASIC18.85■□□□□ 0.61
USP17L11C9JVI0 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 SPDYE18-201ENST00000510091 1050 ntBASIC18.85■□□□□ 0.61
USP17L11C9JVI0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.85■□□□□ 0.61
USP17L11C9JVI0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 AP006294.1-201ENST00000415407 339 ntBASIC18.84■□□□□ 0.61
USP17L11C9JVI0 U91328.1-201ENST00000437528 223 ntBASIC18.84■□□□□ 0.61
USP17L11C9JVI0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 SRD5A3P1-201ENST00000603021 949 ntBASIC18.84■□□□□ 0.61
USP17L11C9JVI0 MIR6069-201ENST00000620069 79 ntBASIC18.84■□□□□ 0.61
USP17L11C9JVI0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 AC005052.1-201ENST00000625181 2492 ntBASIC18.84■□□□□ 0.61
USP17L11C9JVI0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 PCGF3-213ENST00000620529 1899 ntBASIC18.84■□□□□ 0.61
USP17L11C9JVI0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.84■□□□□ 0.61
USP17L11C9JVI0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 PKD1P1-201ENST00000458669 6805 ntBASIC18.83■□□□□ 0.61
USP17L11C9JVI0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms