Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 GPAA1P2-202ENST00000606848 1787 ntBASIC16.65■□□□□ 0.26
CAPN8A6NHC0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 MIR4469-201ENST00000583919 79 ntBASIC16.65■□□□□ 0.26
CAPN8A6NHC0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 AC105917.1-201ENST00000506637 2539 ntBASIC16.65■□□□□ 0.26
CAPN8A6NHC0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 GGT3P-204ENST00000453783 1664 ntBASIC16.65■□□□□ 0.26
CAPN8A6NHC0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 AC022188.1-201ENST00000620960 1664 ntBASIC16.65■□□□□ 0.26
CAPN8A6NHC0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CAPN8A6NHC0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CAPN8A6NHC0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
CAPN8A6NHC0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.64■□□□□ 0.26
CAPN8A6NHC0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CAPN8A6NHC0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 CEND1P1-201ENST00000451006 455 ntBASIC16.64■□□□□ 0.25
CAPN8A6NHC0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 AC106028.4-201ENST00000614509 607 ntBASIC16.64■□□□□ 0.25
CAPN8A6NHC0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 CYP2T1P-202ENST00000641596 2535 ntBASIC16.64■□□□□ 0.25
CAPN8A6NHC0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN8A6NHC0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 AL671277.1-201ENST00000429656 993 ntBASIC16.63■□□□□ 0.25
CAPN8A6NHC0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 RN7SL589P-201ENST00000481268 310 ntBASIC16.63■□□□□ 0.25
CAPN8A6NHC0 FAM86C2P-203ENST00000528684 1004 ntBASIC16.63■□□□□ 0.25
CAPN8A6NHC0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 AL135744.1-201ENST00000565098 629 ntBASIC16.63■□□□□ 0.25
CAPN8A6NHC0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 AKAP8P1-201ENST00000434743 1349 ntBASIC16.63■□□□□ 0.25
CAPN8A6NHC0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN8A6NHC0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms