Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SLC7A15P-201ENST00000424028 1363 ntBASIC14.25□□□□□ -0.13
MBD3L3A6NE82 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 AC098614.1-201ENST00000368528 745 ntBASIC14.25□□□□□ -0.13
MBD3L3A6NE82 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 AC012313.1-201ENST00000593393 3059 ntBASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.25□□□□□ -0.13
MBD3L3A6NE82 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 TPRX2P-201ENST00000535362 881 ntBASIC14.24□□□□□ -0.13
MBD3L3A6NE82 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 AC099568.2-201ENST00000609194 695 ntBASIC14.24□□□□□ -0.13
MBD3L3A6NE82 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MBD3L3A6NE82 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms