Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 KRT18P13-201ENST00000400056 1290 ntBASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 AP000344.2-201ENST00000512987 629 ntBASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 AP000842.3-202ENST00000569238 1080 ntBASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC022145.2-201ENST00000598203 171 ntBASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC196A0A1B0GTZ2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC196A0A1B0GTZ2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 AC211486.1-202ENST00000416371 468 ntBASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 AC142381.1-201ENST00000426099 345 ntBASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 AC211476.1-201ENST00000503899 468 ntBASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 AC024267.1-201ENST00000582320 895 ntBASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC196A0A1B0GTZ2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 MIR648-201ENST00000385046 94 ntBASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 AC245100.5-201ENST00000452108 331 ntBASIC19■□□□□ 0.63
CCDC196A0A1B0GTZ2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms