Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV6-7A0A0A0MS04 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC073621.1-201ENST00000392730 636 ntBASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 UPK3BP1-201ENST00000428678 509 ntBASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 HCG4P8-203ENST00000443049 980 ntBASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRBV6-7A0A0A0MS04 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-7A0A0A0MS04 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.71□□□□□ -0.22
TRBV6-7A0A0A0MS04 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC007292.2-201ENST00000593524 1812 ntBASIC13.71□□□□□ -0.22
TRBV6-7A0A0A0MS04 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.71□□□□□ -0.22
TRBV6-7A0A0A0MS04 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.71□□□□□ -0.22
TRBV6-7A0A0A0MS04 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.71□□□□□ -0.22
TRBV6-7A0A0A0MS04 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-7A0A0A0MS04 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.71□□□□□ -0.22
TRBV6-7A0A0A0MS04 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 FER1L4-210ENST00000615531 5998 ntBASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 AKR1C7P-201ENST00000305623 895 ntBASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms