Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC108751.1-201ENST00000490852 363 ntBASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 AL009183.1-201ENST00000603760 355 ntBASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 AL078644.1-201ENST00000609881 752 ntBASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV5-3A0A0A0MS03 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 VN2R19P-201ENST00000442399 1052 ntBASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 EMBP1-201ENST00000458200 901 ntBASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 AF186996.4-201ENST00000467186 377 ntBASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 MIR4321-201ENST00000592276 80 ntBASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC105250.1-201ENST00000509378 2057 ntBASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRBV5-3A0A0A0MS03 AL589702.1-201ENST00000641229 1509 ntBASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC073439.1-201ENST00000624121 1774 ntBASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC092474.2-201ENST00000424288 719 ntBASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 RHOQP3-201ENST00000437982 621 ntBASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 AC002347.1-201ENST00000569543 541 ntBASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 MIR4751-201ENST00000578027 74 ntBASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 MIR7706-201ENST00000613747 67 ntBASIC15.27■□□□□ 0.04
TRBV5-3A0A0A0MS03 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 AC099063.4-201ENST00000641099 1602 ntBASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV5-3A0A0A0MS03 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms