Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 AC141586.5-201ENST00000624546 2050 ntBASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 AC012313.1-201ENST00000593393 3059 ntBASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 AC139713.2-201ENST00000641328 2723 ntBASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC187A0A096LP49 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 AL139384.1-201ENST00000612143 3047 ntBASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 AC106820.2-201ENST00000563775 3264 ntBASIC15.41■□□□□ 0.06
CCDC187A0A096LP49 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 AL031731.1-201ENST00000642131 2094 ntBASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 AC104596.2-201ENST00000512793 793 ntBASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC187A0A096LP49 TMEM261P1-201ENST00000604899 340 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms