Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC126755.1-201ENST00000525846 6405 ntBASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC034105.1-201ENST00000563488 319 ntBASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AL031432.2-201ENST00000566714 459 ntBASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AL928711.1-201ENST00000570165 459 ntBASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC120114.3-201ENST00000611923 658 ntBASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC010507.1-201ENST00000633895 436 ntBASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC007064.4-201ENST00000637740 555 ntBASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AC079328.2-201ENST00000561241 3354 ntBASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DRB4X5D2U9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AC092384.3-202ENST00000564646 2873 ntBASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AL365203.3-201ENST00000609742 2057 ntBASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AC064836.3-201ENST00000607928 673 ntBASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DRB4X5D2U9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms