Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 AC104640.1-201ENST00000562617 2109 ntBASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 RPL13AP23-201ENST00000480739 586 ntBASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 AC034105.1-201ENST00000563488 319 ntBASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 TCAF2P1-201ENST00000291129 2421 ntBASIC15.92■□□□□ 0.14
PCDHGA11Q9Y5H2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 AC092384.3-202ENST00000564646 2873 ntBASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 AC006449.6-201ENST00000612330 2296 ntBASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 FDX1P1-201ENST00000449115 551 ntBASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 AC109635.5-201ENST00000533593 962 ntBASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 AC064836.3-201ENST00000607928 673 ntBASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 AC023824.1-201ENST00000562945 2975 ntBASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 IL9RP2-201ENST00000423948 1312 ntBASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA11Q9Y5H2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms