Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 HLA-H-201ENST00000383620 1096 ntBASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 MIR4492-201ENST00000581627 80 ntBASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 AL138828.2-201ENST00000615812 383 ntBASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 AL136379.1-201ENST00000623471 2642 ntBASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 AC093525.9-201ENST00000624961 1746 ntBASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA9Q9Y5G4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 OR8S1-201ENST00000310194 1080 ntBASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 AL353705.2-201ENST00000428243 662 ntBASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 SPTLC1P1-201ENST00000447199 261 ntBASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 RN7SL692P-201ENST00000464677 288 ntBASIC15.29■□□□□ 0.04
PCDHGA9Q9Y5G4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms