Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 WASH4P-201ENST00000564273 1246 ntBASIC16.97■□□□□ 0.31
YIPF1Q9Y548 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 AL391825.1-201ENST00000457671 1364 ntBASIC16.97■□□□□ 0.31
YIPF1Q9Y548 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
YIPF1Q9Y548 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 CU639417.3-201ENST00000624240 1404 ntBASIC16.96■□□□□ 0.31
YIPF1Q9Y548 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 GK-202ENST00000378941 458 ntTSL 3 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 AC087499.6-201ENST00000411576 835 ntBASIC16.96■□□□□ 0.31
YIPF1Q9Y548 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 HIST3H2BA-201ENST00000436555 524 ntBASIC16.96■□□□□ 0.31
YIPF1Q9Y548 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 AL589987.1-201ENST00000453380 819 ntBASIC16.96■□□□□ 0.31
YIPF1Q9Y548 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 AC055876.2-201ENST00000531834 546 ntBASIC16.96■□□□□ 0.31
YIPF1Q9Y548 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
YIPF1Q9Y548 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
YIPF1Q9Y548 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.96■□□□□ 0.3
YIPF1Q9Y548 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
YIPF1Q9Y548 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
YIPF1Q9Y548 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
YIPF1Q9Y548 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
YIPF1Q9Y548 AC138969.3-201ENST00000546612 1459 ntBASIC16.95■□□□□ 0.3
YIPF1Q9Y548 AC138932.2-201ENST00000548268 1459 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms