Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.96■■□□□ 1.11
PHF8Q9UPP1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.96■■□□□ 1.11
PHF8Q9UPP1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PHF8Q9UPP1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PHF8Q9UPP1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PHF8Q9UPP1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PHF8Q9UPP1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PHF8Q9UPP1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PHF8Q9UPP1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PHF8Q9UPP1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 LETM1P2-201ENST00000597330 2178 ntBASIC21.95■■□□□ 1.1
PHF8Q9UPP1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 TOMM22P5-201ENST00000416399 439 ntBASIC21.95■■□□□ 1.1
PHF8Q9UPP1 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 FTH1P14-201ENST00000482930 551 ntBASIC21.95■■□□□ 1.1
PHF8Q9UPP1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 CLUHP6-201ENST00000580789 941 ntBASIC21.95■■□□□ 1.1
PHF8Q9UPP1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC21.95■■□□□ 1.1
PHF8Q9UPP1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 SOCS2P1-201ENST00000417727 557 ntBASIC21.94■■□□□ 1.1
PHF8Q9UPP1 KRT18P64-201ENST00000434946 1219 ntBASIC21.94■■□□□ 1.1
PHF8Q9UPP1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 AL355864.2-201ENST00000447420 863 ntBASIC21.94■■□□□ 1.1
PHF8Q9UPP1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 AC068880.1-201ENST00000507289 2297 ntBASIC21.94■■□□□ 1.1
PHF8Q9UPP1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.94■■□□□ 1.1
PHF8Q9UPP1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 TPI1-206ENST00000488464 791 ntTSL 5 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 ZNF767P-206ENST00000513792 565 ntBASIC21.93■■□□□ 1.1
PHF8Q9UPP1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 AC243562.2-201ENST00000561247 970 ntBASIC21.93■■□□□ 1.1
PHF8Q9UPP1 AC120045.2-201ENST00000567334 178 ntBASIC21.93■■□□□ 1.1
PHF8Q9UPP1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC21.93■■□□□ 1.1
PHF8Q9UPP1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms