Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 MRPL3P1-201ENST00000400109 1033 ntBASIC14.49□□□□□ -0.09
DUX4Q9UBX2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 TPM4P1-201ENST00000436100 807 ntBASIC14.49□□□□□ -0.09
DUX4Q9UBX2 FAM197Y8-203ENST00000450145 560 ntBASIC14.49□□□□□ -0.09
DUX4Q9UBX2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 AL139288.1-201ENST00000623748 933 ntBASIC14.49□□□□□ -0.09
DUX4Q9UBX2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 AC126177.1-201ENST00000547829 2218 ntBASIC14.49□□□□□ -0.09
DUX4Q9UBX2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DUX4Q9UBX2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.48□□□□□ -0.09
DUX4Q9UBX2 HNRNPDP1-201ENST00000439535 754 ntBASIC14.48□□□□□ -0.09
DUX4Q9UBX2 FAAHP1-202ENST00000446499 1238 ntBASIC14.48□□□□□ -0.09
DUX4Q9UBX2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 MTDHP4-201ENST00000600287 670 ntBASIC14.48□□□□□ -0.09
DUX4Q9UBX2 AC064862.7-201ENST00000604520 867 ntBASIC14.48□□□□□ -0.09
DUX4Q9UBX2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 AC005915.1-201ENST00000624912 2018 ntBASIC14.48□□□□□ -0.09
DUX4Q9UBX2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.48□□□□□ -0.09
DUX4Q9UBX2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 AC097637.2-201ENST00000624096 1997 ntBASIC14.47□□□□□ -0.09
DUX4Q9UBX2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.47□□□□□ -0.09
DUX4Q9UBX2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms