Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 AC005622.1-201ENST00000636801 1703 ntBASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLCF1Q9UBD9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 AL589739.1-201ENST00000607720 493 ntBASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 TEX28P1-201ENST00000613479 1221 ntBASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 TEX28P2-201ENST00000617764 1221 ntBASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLCF1Q9UBD9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 U82695.1-201ENST00000635752 1889 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 UBALD1-205ENST00000590891 2641 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 AC080080.1-201ENST00000625121 2420 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 MIR661-201ENST00000384842 89 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 RPL37AP1-201ENST00000412502 279 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 AL080243.2-201ENST00000418783 582 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 TSPY16P-201ENST00000449843 468 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 POU5F1P6-201ENST00000466990 990 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms