Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HACD3Q9P035 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HACD3Q9P035 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HACD3Q9P035 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HACD3Q9P035 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.59■□□□□ 0.25
HACD3Q9P035 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.59■□□□□ 0.25
HACD3Q9P035 DNAJB3-201ENST00000446806 729 ntBASIC16.59■□□□□ 0.25
HACD3Q9P035 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.59■□□□□ 0.25
HACD3Q9P035 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.59■□□□□ 0.25
HACD3Q9P035 C20orf181-201ENST00000623918 480 ntBASIC16.59■□□□□ 0.25
HACD3Q9P035 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.59■□□□□ 0.25
HACD3Q9P035 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.59■□□□□ 0.25
HACD3Q9P035 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HACD3Q9P035 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
HACD3Q9P035 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HACD3Q9P035 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
HACD3Q9P035 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.58■□□□□ 0.25
HACD3Q9P035 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.58■□□□□ 0.25
HACD3Q9P035 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
HACD3Q9P035 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HACD3Q9P035 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HACD3Q9P035 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HACD3Q9P035 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.58■□□□□ 0.25
HACD3Q9P035 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HACD3Q9P035 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HACD3Q9P035 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HACD3Q9P035 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HACD3Q9P035 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HACD3Q9P035 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HACD3Q9P035 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 FAM58CP-201ENST00000435741 640 ntBASIC16.58■□□□□ 0.24
HACD3Q9P035 MKNK2P1-201ENST00000437526 628 ntBASIC16.58■□□□□ 0.24
HACD3Q9P035 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 ACTG1P14-201ENST00000446382 1122 ntBASIC16.58■□□□□ 0.24
HACD3Q9P035 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.58■□□□□ 0.24
HACD3Q9P035 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 FAM86C2P-203ENST00000528684 1004 ntBASIC16.58■□□□□ 0.24
HACD3Q9P035 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 RARRES2P8-201ENST00000566335 367 ntBASIC16.58■□□□□ 0.24
HACD3Q9P035 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.58■□□□□ 0.24
HACD3Q9P035 AC091812.2-201ENST00000619081 385 ntBASIC16.58■□□□□ 0.24
HACD3Q9P035 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HACD3Q9P035 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.58■□□□□ 0.24
HACD3Q9P035 AKAP8P1-201ENST00000434743 1349 ntBASIC16.58■□□□□ 0.24
HACD3Q9P035 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HACD3Q9P035 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HACD3Q9P035 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.58■□□□□ 0.24
HACD3Q9P035 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.58■□□□□ 0.24
HACD3Q9P035 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.58■□□□□ 0.24
HACD3Q9P035 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HACD3Q9P035 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 ALOX12P2-203ENST00000570921 1945 ntBASIC16.58■□□□□ 0.24
HACD3Q9P035 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.58■□□□□ 0.24
HACD3Q9P035 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HACD3Q9P035 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.57■□□□□ 0.24
HACD3Q9P035 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.57■□□□□ 0.24
HACD3Q9P035 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HACD3Q9P035 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HACD3Q9P035 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HACD3Q9P035 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.57■□□□□ 0.24
HACD3Q9P035 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.57■□□□□ 0.24
HACD3Q9P035 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.57■□□□□ 0.24
HACD3Q9P035 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.57■□□□□ 0.24
HACD3Q9P035 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HACD3Q9P035 AC016027.1-202ENST00000607927 1699 ntBASIC16.57■□□□□ 0.24
HACD3Q9P035 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HACD3Q9P035 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.57■□□□□ 0.24
HACD3Q9P035 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HACD3Q9P035 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 AC126755.1-201ENST00000525846 6405 ntBASIC16.57■□□□□ 0.24
HACD3Q9P035 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HACD3Q9P035 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms